Gene Sde_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3804 
Symbol 
ID3966878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4804615 
End bp4805157 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID637922901 
Product4-hydroxybenzoate polyprenyl transferase 
Protein accessionYP_529271 
Protein GI90023444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTG CGGTGCTAAT AGCCCTAAAT GATATGGTCG AGGAAGTCTT TTCTATGGCC 
GTATGGGATC AGGTTCTCGC AAAAGTGAAG CCTGATTCCG AGGGCATATA CATTTCGGCA
GAGAGCTACG ACGACGCCGA GGTAGTAGGG CTGGTTGTTG CGTTATCGGA GCTAACCGGG
GTGCCGGTGA ATGAGTTGGT GCGAAGTTTT GGTACCTATT TATTTCATCA GTTGAATAGT
AAGTTCCCAA TTTTTTGTGA TTTGCACACC AATATATTTG ATCTGCTATC GAGCATTCAC
GGGGTTATTC ACAAAGAGGT GGATAAGCTT TATAGCAATG CGTCGCTTCC CACCATTAAT
TGTACTAAAT TATCCGATTC GCATTTACAA ATGCGTTACT ACTCCCCGAG AAAATTATGC
GTATTGGCCG AGGGTTTAAT AATCGGCGCG GCTGAGCACT ACAAAGCAGA TGTTTCTGTA
AGTCAGTGTC AGTGCGTGCA TCAGGGGGCT GATGAATGTT TAATAGACGT TAAAATTATA
TGA
 
Protein sequence
MKGAVLIALN DMVEEVFSMA VWDQVLAKVK PDSEGIYISA ESYDDAEVVG LVVALSELTG 
VPVNELVRSF GTYLFHQLNS KFPIFCDLHT NIFDLLSSIH GVIHKEVDKL YSNASLPTIN
CTKLSDSHLQ MRYYSPRKLC VLAEGLIIGA AEHYKADVSV SQCQCVHQGA DECLIDVKII