Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3782 |
Symbol | |
ID | 3966856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4782362 |
End bp | 4782790 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637922879 |
Product | hypothetical protein |
Protein accession | YP_529249 |
Protein GI | 90023422 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000165271 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAT TAATACTTTT AAGCGCGCTT TGCTTATTTA CTACCCTGCT TACCGCCTGT AATCAACAAG CAAATAATAG TCAGGGCAAT AGCGATAACG GTAACATTGT TTGGACAGAC GAGCAGCTCG CTAAAAACAT AGCATTACAG CCAATTGCTA GCGATGGCGA CGAAAGTAAA TTTTATATTC GCCTGCAAGG CAGCGAGCAA CCACACTACC ACGACGATCA CGATTTAACC GTAGAGGTAT TAACCGGTAC TGCGGTTATT CACTTTAAAG AGTCGAGTCA AAGTGTAAAA GCGGGCGATA CGATAGTCAT TAAAAAAGGC ACCTACCACT GGGCAGAAAA CACCGGCGCG GAAGCCAGTG TAGTAATAGG TACCTTCACA CCCAAATTAC AGGGCAAAGA TTTTAGATTG GCAGAATAG
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Protein sequence | MYKLILLSAL CLFTTLLTAC NQQANNSQGN SDNGNIVWTD EQLAKNIALQ PIASDGDESK FYIRLQGSEQ PHYHDDHDLT VEVLTGTAVI HFKESSQSVK AGDTIVIKKG TYHWAENTGA EASVVIGTFT PKLQGKDFRL AE
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