Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3737 |
Symbol | |
ID | 3966772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4737245 |
End bp | 4737910 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922834 |
Product | NADH dehydrogenase |
Protein accession | YP_529204 |
Protein GI | 90023377 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTGA GCGAAGCGTT ACAACAGCGC AAATCTGTGC GTGCCTATTT AGACAAGCCC GTGCCACAGG AAGTAATTAC TCGTATATTA AACGCCGCCC GTTGTGCGCC TTCAGGCACC AACACCCAAC CCTGGGAGGT GGCCGTAACA ACAGGCAAAA CCCGCGATGA CATTGCCAAT AAAATGGTGG CAACGTTCCG TGCAGGGGGT AAGGGCCACA TGGCCTATAA TTACTACCCT ACCGAATGGA AGGCACCTTT CAAGCCGCGC CGAGTAGCTT GCGGGCTACA ACTCTACAGT ACCTTGGGCA TAAAAAAGGA AGACACCACT CGCAGAGCTG AACAGTGGGA AGCAAACTAC CATTCCTTTG GTGCCCCCGT TGTAATGTAC TTTTTAATGG ATAAAATTAT GGAAACCGGC TCATTCATGG ATTACGGCAT GTTTATCCAA TCCATTATGC TGGCAGCAGT TGAAGAGGGC TTGGCAACCT GCCCGCAAGC AGCGCTGGCA GAATACCCCG ACATAGTGAA ACAAACCCTA GGCTACGACG ATAACTACAT TGTGGTTTGC GGCATGGCAC TGGGCTACGA AGATAAAAGC GCCCTTATTA ACAGCTACCG CACACCAAGA GAAGAAGTAG CTAGTTTTAC ACGCTTTTTT GATTAA
|
Protein sequence | MKVSEALQQR KSVRAYLDKP VPQEVITRIL NAARCAPSGT NTQPWEVAVT TGKTRDDIAN KMVATFRAGG KGHMAYNYYP TEWKAPFKPR RVACGLQLYS TLGIKKEDTT RRAEQWEANY HSFGAPVVMY FLMDKIMETG SFMDYGMFIQ SIMLAAVEEG LATCPQAALA EYPDIVKQTL GYDDNYIVVC GMALGYEDKS ALINSYRTPR EEVASFTRFF D
|
| |