Gene Sde_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3559 
Symbol 
ID3966421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4519579 
End bp4520124 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID637922656 
Producthypothetical protein 
Protein accessionYP_529026 
Protein GI90023199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.733276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTA CAAGTTGTAA AGCGGGTAAT TTGGCACCTG CTTATCTCGA TACTTTGTTT 
CCGTGTCACA CATGTGACAA TTGCGGGGGC AGCTTTGTAT ACCTAGCAGA TTACCTTAAA
TGGAAAGAGG GTAACCCCAA CCTTGCCAAC TTAACGGTGA GTGGTGAGTC ATTTGAAGTG
AGCGAAACAG CGCAGGCCAT GATATGCCCT AAAACAGGGT TGTTTATGAC CAAGTATCGC
ATTGCCAGTA ATACCGATCA CCGTATAGAC CTTAGCCCCA CTATTAATGC AATTTGGATG
GACAAGGGTG AATGGGAGCT ATTGAAAACC CGCGGCCTGG CTGGACGGCT AAACGAAATA
TTTACCGCCC CTTGGCAAAA TAAAATACGC GCGGCTAAAA CAGCTGAGGT ATTAGACGGT
ATCTACGCCA AAGAGTTTGG TGAAAACTAT GCAGCCATTA AAGCCTTTCG TGAGCTTATT
CAGCCTTTGG ATAATCGAGC CGAAATAATT GCGTTTCTGG TTTCCGACGA CCCCTATAAA
GCCTAA
 
Protein sequence
MKCTSCKAGN LAPAYLDTLF PCHTCDNCGG SFVYLADYLK WKEGNPNLAN LTVSGESFEV 
SETAQAMICP KTGLFMTKYR IASNTDHRID LSPTINAIWM DKGEWELLKT RGLAGRLNEI
FTAPWQNKIR AAKTAEVLDG IYAKEFGENY AAIKAFRELI QPLDNRAEII AFLVSDDPYK
A