Gene Sde_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3557 
Symbol 
ID3966419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4518334 
End bp4518882 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID637922654 
Producthypothetical protein 
Protein accessionYP_529024 
Protein GI90023197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.566372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAG CGGTTTTTGT AACGCTTAAA ACAATGATCG AAGAATCTCA CGGGCCTACC 
GCGTGGGCGG CATTAGTGGA TAAAGTCGCA CCTGAGTGCG AGGGCGTTTA CGACGCAAAT
GAAAACTACC CTGATGCCGA TGCAATAGCC TATATAGGGG CCGTGGCTGA ATTGCTAAAT
AGCTCTGCAT CCGCTGTAAC AGAGATTTTT GGTCGCTATT TATTCGATGC GCTCAACAGC
ATGTCGCCGC AGTATGCTGC TGCATCGCCT ACCTTATTTG GATTTCTCCA GAGCATTGAA
CCCCTTATCC ATCGCGAAAT TCGTAATAGT AATAAATCGA GCAGTTTGCC GGTTATTGTT
GTGAAGGTTA CGGATGAGCA ACACTTGCTT ATGCGCTACA ACTCACCCAG AAAGCTTTGT
TTTTTGGCTG AGGGGCTTAT TCGAGGCGCC GCTAAGCACT ATGGAGAGAC TGTTGAGCTC
AGTCACGACA AATGCCTACA CCGAGGCGAT ATCTGCTGTG AGCTGAATGT TATAAAGCTT
GCGACTTAG
 
Protein sequence
MKGAVFVTLK TMIEESHGPT AWAALVDKVA PECEGVYDAN ENYPDADAIA YIGAVAELLN 
SSASAVTEIF GRYLFDALNS MSPQYAAASP TLFGFLQSIE PLIHREIRNS NKSSSLPVIV
VKVTDEQHLL MRYNSPRKLC FLAEGLIRGA AKHYGETVEL SHDKCLHRGD ICCELNVIKL
AT