Gene Sde_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3530 
Symbol 
ID3966372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4483810 
End bp4484541 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content49% 
IMG OID637922627 
Producthypothetical protein 
Protein accessionYP_528997 
Protein GI90023170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA CCCAGCAATT ACTGGACACC CTAAAGCAGC AATTGCGTGC ACAGGGCAAA 
ACCTACCGCT GTTTGGCTGC GCATTTGGCG CTAAGCGAGG CATCGGTTAA GCGCTTGTTT
AGTGAGCGTA CATTCACCCT AGAGCGCTTA GAGCAGGCGT GCGATTTTAT CGGCTTGGAC
ATTGGCGAGC TAGCGGCATT AAGCCGCGCA GCACAAGCTC GACTACAGGC GTTAACCCGC
GCGCAGGAAG CAGAAATAGC TGAAGATACC GCGCTACTGT TGGTGGCCAT CAGTGTGATT
AACGGCTTCT CGTTCAACGA TTTGTTAGAT TACTACGCCT TAAGCGAACA GGAGTGTATT
CGCAAGCTCG CCCATTTAGA TAGGCTAAAA CTTATCGATC TGCTGCCCGG CAATCGGATT
CGCCTGCGCG TAGCCCCCAA CTTTAGTTGG TTAGCTGATG GGCCCATTCA GCGATTCTTT
CAACTTAAAG TACAACAGGA ATTTTTTAAC AGCCGCTTTA ATGCCGATAC AGAAAACTTA
ATGGTGTTAA ACGGTGTGTT ATCTCGGGCG TCTAATCAAA AGCTGCAAAC GCTAATGGGT
AAAATGTACC AAGAGTTTAA TCAGCTAATG AAGGATGACG CAGCGCTGCC CATGGCCGAT
CGCAAGGGCA ATACGTTGGT ACTGGCGTTG CGTCAATGGC AATACCCGCT GTTCAAACAA
TATATGAAAT AA
 
Protein sequence
MKQTQQLLDT LKQQLRAQGK TYRCLAAHLA LSEASVKRLF SERTFTLERL EQACDFIGLD 
IGELAALSRA AQARLQALTR AQEAEIAEDT ALLLVAISVI NGFSFNDLLD YYALSEQECI
RKLAHLDRLK LIDLLPGNRI RLRVAPNFSW LADGPIQRFF QLKVQQEFFN SRFNADTENL
MVLNGVLSRA SNQKLQTLMG KMYQEFNQLM KDDAALPMAD RKGNTLVLAL RQWQYPLFKQ
YMK