| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3479 |
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| Symbol | |
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| ID | 3966321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4433419 |
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| End bp | 4434108 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922576 |
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| Product | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 |
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| Protein accession | YP_528946 |
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| Protein GI | 90023119 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.111551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0139812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT GGTCCAAAAT GGTTACTGCG TTACGTGGCG GTGTAAACGA AGCGGGCGAG
CTTATTGTTG ACAGTCAGGC GTTGCGTATT CTCGATCAAG AAGTTCGCGA CGCAACGGCT
GAGTTAAAGC ATTCTAAAGA TGGCTTAACC ACAATTTTGG CACGCCAAAA GCTGGCGGAA
GAAAAAGCGT CGAGCATTGG CGAAAGCATT GCGGAATACG AAGGTTATGC AGTGAAAGCT
ATGGAAAAAG GCGACGATGC ATTAGCGCTA GAAGTGGCCG AAAAAATAGC CGACCTAGAA
AACCAGCTGG ATACCGAGAA GAAATCGGCG GCCCAGTTTG CGGCGAGTGC TAACGATTTG
CGCAAAGCTA TTTTAGCAGC CGAGCAAAAT ATAAAGCGTA TTAAGCAGCA AATAGATACG
GTGAAAGCCA CCGAAAATGT TCAGCGCGCG CAAGTAGCGG TTGCTGAGCG TCACAATGGC
TCAAATTCTA AATTGCGTAC CGCTATGGAT TCGCTCGACC GCATTAAAGA AAAGCAAGCG
CTTAAATCTG CTCAAATTAA GGCCGCGGCC GAATTAGCAG AGGACTCTCG CGAAGACTCA
TTGCAAGACA AGCTCGAAAA AGCAGGGATT GCAGCAAGCG GTGCTAGAGC GCAGGATGTG
CTGGATAGAC TTAAAAACAA AAAGTCGTAA
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| Protein sequence | MNIWSKMVTA LRGGVNEAGE LIVDSQALRI LDQEVRDATA ELKHSKDGLT TILARQKLAE
EKASSIGESI AEYEGYAVKA MEKGDDALAL EVAEKIADLE NQLDTEKKSA AQFAASANDL
RKAILAAEQN IKRIKQQIDT VKATENVQRA QVAVAERHNG SNSKLRTAMD SLDRIKEKQA
LKSAQIKAAA ELAEDSREDS LQDKLEKAGI AASGARAQDV LDRLKNKKS
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