| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3457 |
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| Symbol | |
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| ID | 3966280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4398109 |
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| End bp | 4398771 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922554 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_528924 |
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| Protein GI | 90023097 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00766476 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTACCG GTATTGTTGA AGCCAAAGGC ACCATAGCCA AACTAGAGCC GCGCGACGGC
GATGTGCGGT TGTGGGTAAC CGCCCCCGAT CTCGACTACA GCGATGTAGC TTTGGGTGAC
TCGATAGCCA CCAATGGCGT GTGTCTAACC GCTGTGCAGT TGCCGGGTAA CGGCTTTGCT
GCGGATGTAT CGCGCGAAAC CTTAAGCTTA ACTACCTTGG TAAATTGGCA GCCCGGCACT
GTGGTTAACC TAGAAAAAGC ACTTACCCCG CAAACCCGCT TGGGGGGGCA TATAGTAAGT
GGCCATGTAG ATGGCGTAGG GGAAGTGGTG TCGCGTCACC CAGATGCGCG CTCGGAGCGA
TTTACTATTC GCGCCCCTAA AGAATTGGCG AAATACATTG CTCACAAGGG GTCTATAACC
GTCGACGGCA CCAGTCTTAC CGTAAATGCC GTAAATGGTG ATTTATTCGA GCTGAATATT
GTGCCCCATA CGCTGCAATG GACCATAATT GATAGTTATA CCGCGGGCAC CAAAGTAAAT
TTAGAAGTGG ACGTAATAGC CCGCTACTTA GAGCGCTTAC TGCTAGGCGA CAAGGCTGCC
GAGCCCAATG CGCAAAGCGA GATGACCGTA CAGTTTTTAG CGGAAAACGG CTATTTAAAA
TAA
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| Protein sequence | MFTGIVEAKG TIAKLEPRDG DVRLWVTAPD LDYSDVALGD SIATNGVCLT AVQLPGNGFA
ADVSRETLSL TTLVNWQPGT VVNLEKALTP QTRLGGHIVS GHVDGVGEVV SRHPDARSER
FTIRAPKELA KYIAHKGSIT VDGTSLTVNA VNGDLFELNI VPHTLQWTII DSYTAGTKVN
LEVDVIARYL ERLLLGDKAA EPNAQSEMTV QFLAENGYLK
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