| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3446 |
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| Symbol | |
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| ID | 3966250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4383850 |
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| End bp | 4386336 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922543 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | YP_528913 |
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| Protein GI | 90023086 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000339618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000208184 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACAG GTTTAAAACT ATTACTGCGC GATTGGCGCG GCGGCGAACT GGGTTTATTG
CTGGTATCGC TAATACTCGC CACGGCCACT ATTACATGCA TTAGCCTATT CGCCAGCCGT
ATACATAACT CGTTATACGA TGAAGCCAGC CAGTTTTTAG CAGGCGATGC ACAAATAACC
GGCTCGGCCC CCATACCAAC CCCACTGCAA AACGAAGCGA CACAACAAAA CCTACAAGGT
GCACTTACTA TACAATTTCG CGCGATGGTG TTTTCGGATG AGAGCATGCA TATATCGGCC
ACAAAAGCTG TTGCAGCTAG CTACCCACTA AAAGGCCAAA TACAAATTGC CGATACCCCT
TTCGGCGCCC CCACCCTAGT TAACCACGGG CCAGCCGAAG GCGAGGTTTG GCTGGCATCG
CGCTTATTTG GCGCACTGGC CATAAATATT GGCGATACTG TGCAAATTGG CGAAGCCAAC
TTTAAAGCAA CCGCGGCCAT AATTAAGGAA CCCGACAACG CGCAAAGTTT ATTTGGTGTA
GCCCCACGCG CGCTTATTCA TATAAATGAC GTAGAAAAAA CACAGGCTAT TCAATTGGGC
AGCCGCGTTA ACTACACGTG GATGCTTGCC GGCGACAGCA GTAGCGTAGA AACATTTAAA
CAATATTTTG AAGCCAACAA AGGCGAACAT CACCGCTGGG TAGATATTCA CGAGCAAAAC
CGCAGCGTGG GCAGCGCGCT AAACCGCGCA GAAAGCTTTT TATTATTAGC GGGCAGTTTA
GGTGTTGTGC TGTGCGGGCT TGCCATTGCG TTAGCCGCCA GACGCTACGC CATGCGACAA
GCAACGAATG TAGCGCTACT TAAAACATTC GGCCAAACAC CCAACAAAAT TAGCCGCCTT
TATTGTGGCA ATTTATTAGC TTTAGGCATG GTGGGTATTT TACCGGGCGC AGTGGTGGGC
TGGGCCTTAC ACTGGGGAAT AATTTTCGCG CTGCAAGATT TACTGCCCAA TGGTTTAGCT
AGCGCATCAG TAAGTGCGCT GTTTATTGGG GCTGGGTCTG GCATTGTGGC GCTGGCGGCG
TTTGCTGCAC CACCTATACT AAGTTTACGC CAAGTTTCCC CCGCCGCAGT TATACGATTA
GATAGCCAAA GCGCATTAAA CTTTGGCTGG CTAAGTTGGC TGCCCGGCGT ACTTGCCATT
ATTGGTTTAA TTTTTTGGTA CAGCCAAAGC CTGCAATTAA CCTTGGTGCT TACATTAGGC
TTGGCGGTTT GCTGTATTGG TATATCTATT TGTGCCCGCC TTATTATTTT GGCTAGTCGC
GTTACCACCA AAAAACTTAC CGGAAGCTGG CGTTTAGGCT TGGCAAATTT ACAGCGCCAC
AGGCAAATGA ACAGCGTACA AATTTTGGTG TTTTCCACCT TATTAATGTT GCTATTTACC
CTTACGTTAA CGCGCACGAG TTTAATTAGC CAATGGCAAA ACCAAATACC AGAAGGTACC
CCCAACCATT TTGTATTTAA TATTTTTTCT GAAGACCGCA CACCAATAGC AGAAAAATTA
GCTAGCGCAC AGGTAGAGCA CAGCCCGTTT TACCCCATGA TGCGCGGTCG CTTAATAGAA
GTGAATGGCG TAACAGTAAA AGACATATTA GAAACCGAAG AAGTACCCCA CAATTACGCA
CGCGAATTAA ACCTAACCTG GTCTAACACC TTAGGTAGCG ACAATAAAAT TGAGCAGGGC
GAATGGTGGC AAACCAACAC CCCGCGCCCA CAGGGCTTGT ATGTTTCTGC AGAGCTAGAA
TATGCCACCG GCTTAAACAT GCAACTTGGC GATGTTCTTA CCTTTAGCAT ATCCGGTGAG
CGAGTAAACG CAGAGCTTGC GAGTATTCGG TCTGTGCAGT GGGATTCGAT GAACCCCAAT
TTCTATATGA TTTTCGACCG CACCGTTTTA GATGGCACCG CAGCAAATTG GCTTACTAGC
TTTTATTTAG CACCCGACCA AAAGCCTTTT TTAAACGACT TAATTAAAAC CTACCCAACG
GTATCAGTTA TCGAGCTAGA CCAACTGATT GCGCAACTGC AATCCATAGT TAGCCAAGTT
ACGCTCGCCG TAGAATTTAT TCTTATGCTG GTACTTGCCG CTGGGGTATT GGTATTAATT
AGCTCAGTAC AAGCTACGCT AGATGTACGC ATGCAAGAAA GCGCCATATT GCGCACCCTA
GGCGCACCTA AACGCTTAGT GGGCAATATA CTGTTAATAG AATTTGGTGC ACTTGGTGCT
CTGGCGGGCT TACTTGCCGC AGTAGGCACA GAAACCGCCT TTTACTTTTT ACAAACCCGC
GTATTCAACC TGCAATACCA ACCACAACCT ATCATGTGGC TAGTAGCACC CTTTATAGGC
GCAGCCCTAA TAGGCGCCGT GGGCTGGGCA TCTACACGTA AGGTAGTACA CATAGCACCC
GCTAAGTTAT TGCGGGAAAT TGGCTAA
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| Protein sequence | MKTGLKLLLR DWRGGELGLL LVSLILATAT ITCISLFASR IHNSLYDEAS QFLAGDAQIT
GSAPIPTPLQ NEATQQNLQG ALTIQFRAMV FSDESMHISA TKAVAASYPL KGQIQIADTP
FGAPTLVNHG PAEGEVWLAS RLFGALAINI GDTVQIGEAN FKATAAIIKE PDNAQSLFGV
APRALIHIND VEKTQAIQLG SRVNYTWMLA GDSSSVETFK QYFEANKGEH HRWVDIHEQN
RSVGSALNRA ESFLLLAGSL GVVLCGLAIA LAARRYAMRQ ATNVALLKTF GQTPNKISRL
YCGNLLALGM VGILPGAVVG WALHWGIIFA LQDLLPNGLA SASVSALFIG AGSGIVALAA
FAAPPILSLR QVSPAAVIRL DSQSALNFGW LSWLPGVLAI IGLIFWYSQS LQLTLVLTLG
LAVCCIGISI CARLIILASR VTTKKLTGSW RLGLANLQRH RQMNSVQILV FSTLLMLLFT
LTLTRTSLIS QWQNQIPEGT PNHFVFNIFS EDRTPIAEKL ASAQVEHSPF YPMMRGRLIE
VNGVTVKDIL ETEEVPHNYA RELNLTWSNT LGSDNKIEQG EWWQTNTPRP QGLYVSAELE
YATGLNMQLG DVLTFSISGE RVNAELASIR SVQWDSMNPN FYMIFDRTVL DGTAANWLTS
FYLAPDQKPF LNDLIKTYPT VSVIELDQLI AQLQSIVSQV TLAVEFILML VLAAGVLVLI
SSVQATLDVR MQESAILRTL GAPKRLVGNI LLIEFGALGA LAGLLAAVGT ETAFYFLQTR
VFNLQYQPQP IMWLVAPFIG AALIGAVGWA STRKVVHIAP AKLLREIG
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