Gene Sde_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3390 
Symbol 
ID3965939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4324112 
End bp4324507 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content44% 
IMG OID637922487 
Producthypothetical protein 
Protein accessionYP_528857 
Protein GI90023030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.420538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAC TTTACATACT AACCGTAGTT TTTCTACTAA GCTTTGGCAC CCTCGCATTC 
GCAGATGACC AGCGTTTACA CATATTATTT TCACAGCAAC AATCGGATGT ACAAATACAA
GGCGCCGGCA CCGTTGTAAG AATACTGCCC GACGATACAG ATGGCAGCCG CCATCAAAAG
TTTATTGTAA AACTAGACTC CGGCCAAACG TTACTAATAG CTCACAATAT AGATCTAGCC
CCACGTGTAG CTAATCTACA AGAAGGAACT CGCATTGCCT TTTATGGCGA ATACGAGTGG
AACGCCAAAG GCGGAGTAAT ACACTGGACC CACAAAGCCC CACGCAATAA CCATGAGCAC
GGCTGGCTTA AATATAATGG CGTTACGTAC CAATGA
 
Protein sequence
MKKLYILTVV FLLSFGTLAF ADDQRLHILF SQQQSDVQIQ GAGTVVRILP DDTDGSRHQK 
FIVKLDSGQT LLIAHNIDLA PRVANLQEGT RIAFYGEYEW NAKGGVIHWT HKAPRNNHEH
GWLKYNGVTY Q