| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3371 |
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| Symbol | |
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| ID | 3965920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4297950 |
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| End bp | 4298651 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922468 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_528838 |
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| Protein GI | 90023011 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.679451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0292733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG AGTACCCCTT GATACCTGCA ACACTGTTGC GACGTTACAA ACGCTTTCTC
GCGGATGTTG AGTTAAGCGA CGGAAGCACA ATAACAGTGC ACTGCCCAAA CACCGGTAGC
ATGCGTAATT GTATTGTGGA AAACAGCCCC TGTTGGCTGC TGGATTCCGC AAACCCTAAG
CGTAAGTATA GATACAGTTT GGAGCGAGTG ACCACTCCAA CAGGCGCAGT GGCAGGAATA
AACAGCGCGA GCGCAAATGG GTTGGTGATC GCGGCAATCG AGAATGGTGT TATTAGCGAG
CTGCAGGGCT ACGACGAATT AGCTAGAGAG CAGCGTTACG GCGACGAAAA ATCCCGTATA
GATATATTGC TAAGTAAGCC CGAAGAACAG TGCTATATCG AAGTAAAAAG TGTGACTTTG
GAGGAGGGGA AGGGTGAGGG CTTCTTCCCC GATGCCGTAA GTACGCGCGG CCAAAAACAC
TTGCGCGAAT TAATGGCAAT GCGGTCGCAG GGCCATCGCG CCGTACTGTT TTTTTGTGTG
CAGCACTCGG GTATAACAAA AGTGGCTGCA GCCGAACATA TCGACCCCGC CTACGCTGCT
CTGTTTAAGC AGGCCGTTAA TGAAGGGGTG GAAGTGATTG CTTACGGTGT TGATTTGGGT
ATAGAGGGCA GTGTTATCAC TAAAAAGCTC AAAGTAGTGT AG
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| Protein sequence | MKFEYPLIPA TLLRRYKRFL ADVELSDGST ITVHCPNTGS MRNCIVENSP CWLLDSANPK
RKYRYSLERV TTPTGAVAGI NSASANGLVI AAIENGVISE LQGYDELARE QRYGDEKSRI
DILLSKPEEQ CYIEVKSVTL EEGKGEGFFP DAVSTRGQKH LRELMAMRSQ GHRAVLFFCV
QHSGITKVAA AEHIDPAYAA LFKQAVNEGV EVIAYGVDLG IEGSVITKKL KVV
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