| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3354 |
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| Symbol | |
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| ID | 3965903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4281093 |
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| End bp | 4282463 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922451 |
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| Product | ribose 5-phosphate isomerase |
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| Protein accession | YP_528821 |
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| Protein GI | 90022994 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000158163 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.115638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTACGGT TATTTAATCG CAACTCACTT GCTGCGCGCT TACTTATTGC ATCGCTATGC
ATTTTGCCTA TCTTGCTTGT TATTATTGCG CTAGCACTCG ACAAAGCGTT TCGCTCAAGC
CTCGTAAATG CCGAACAAGA AGCCCTGCAA GCACACTTTT ACTCGCTGCT TGGCGCGGCA
GAGCCAGACA ACAAAGGCCT GCAATTACCC GAAGTACTCG ACCAGCCCAA ATTCAACCTG
CACGAATCTG GGCTTTACGC TTGGGTTATC GATGAGCAGG AACACCTTGT TTGGCAATCG
GAATCAGCAA GGCTTACCCT CGCCCTTAAA CCAGAAAGCT TCGCCCATCC GCTGGCGCAG
GGTGAGCCGC AGTTTATTCA AACCGAGCTT AGTGGCAGCC AATATTTTGT TTATAACTAT
CGCATCGTGT GGGAGTTTGA AGACGGTGAT CACGCTTTCG ATTTTTACCT CGCACACACC
GCCTCGGCCA TGGAAAAAGA GCTTAAACAC TACCGCCGCA CCCTGTGGAT TTGGCTCACG
CTGCTCACCT TTATCACGCT CTTTTCACAG TGGCTTATAG TGCGCTGGGG CTTGCGCCCC
TTAGCTGGTC TCGCCCGCGA ACTAAGCGAT TTTCAAGAGG GCAAAGCCGC TAAAATTACC
GGACAATACC CTAAAGAAAT TGCCCCTGTT ATTAACAGCT TAAACCTTGT GTTAGATAGC
GAAAAAGCAC AACGCACCAA GTATAAAAAC ACCCTTGGCG ATTTGGCCCA CAGCCTAAAA
ACGCCGCTGG CCATTGTGCG ATCTATTCTC GAAAGCCAAA GTGCATTGGG CGAAAGCCAG
TCAAAACAAA CCATTGATGA GCAGGTTAAT CGCATGTCCG AAATAATCGG CCATCAATTG
CGCCGCGCCA CCAATGTTAG CACCAATGTA AATCAGCGTC TCACCAACTT ACACAGCATT
AGCGCACGTT TAGGCGGTGC ATTAGAAAAA GTGTATCGCG ATAAAAACAT TACCTTTACC
AACAGCGTTA GCGAAGACGA TTGCTCGCTT ATTGAAGAGC AAGATGCCAT GGAGCTTATT
GGTAACATTC TGGAAAATGC ATTTAAGTAC GGCCACCAAC AGGTAATGAT TAGCAGCGAA
AAAGACGGCA ACAATATAAC CCTGTATATT TCCGACGATG GCCCAGGCGT AAGCGCAGAC
AAACGCAGCG CAATACTTAC CCGCGGCGCG CGCGCAGATA CCGCCACCGC AGGCCAAGGC
ATTGGCCTTG CCATAAGCAT AGATATACTA AGCAGCTATG GCGGCAGCCT AGAAATAGAT
GACAGCACCC TAGGTGGTGC CCGCTTTGAA ATAAGCCTTC CCTCTCACTA A
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| Protein sequence | MLRLFNRNSL AARLLIASLC ILPILLVIIA LALDKAFRSS LVNAEQEALQ AHFYSLLGAA
EPDNKGLQLP EVLDQPKFNL HESGLYAWVI DEQEHLVWQS ESARLTLALK PESFAHPLAQ
GEPQFIQTEL SGSQYFVYNY RIVWEFEDGD HAFDFYLAHT ASAMEKELKH YRRTLWIWLT
LLTFITLFSQ WLIVRWGLRP LAGLARELSD FQEGKAAKIT GQYPKEIAPV INSLNLVLDS
EKAQRTKYKN TLGDLAHSLK TPLAIVRSIL ESQSALGESQ SKQTIDEQVN RMSEIIGHQL
RRATNVSTNV NQRLTNLHSI SARLGGALEK VYRDKNITFT NSVSEDDCSL IEEQDAMELI
GNILENAFKY GHQQVMISSE KDGNNITLYI SDDGPGVSAD KRSAILTRGA RADTATAGQG
IGLAISIDIL SSYGGSLEID DSTLGGARFE ISLPSH
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