| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3332 |
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| Symbol | |
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| ID | 3965881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4259729 |
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| End bp | 4261963 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922429 |
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| Product | Outer membrane receptor proteins mostly Fe transport-like |
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| Protein accession | YP_528799 |
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| Protein GI | 90022972 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0148942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT TTTTGAATAT AGGAATAGGT TTACTTTTCA TCTTCGGTGT ATCTGCTAAC
GCAGAGAATG GGCCGAGCTT GCTTGTTGAT ATGAGCTTAG AGCAGCTACT CAATATTCCT
ATTAAAACGC GCCACTTTAC CGAGCAGTTA AATAGTGCGC CGCGCCCCCT CTCTGTTTAC
ACCGATTCTA CACTGCACCG TAACCTTGTT CATTCATCCT ACGATTTAAG TTTGTTAGTG
CCCAATTTTT CAATGCACCG CAATTTTGGT CGCTATCAAG AGCGGCCTGT TATACGTGGC
GTGGCATCCA TCGTGGGGGA GTCACCTGCG GGGATTCTTA TCGACGGAAT AAGCGTATCG
AATATGACGC AGTCGATACC CATGCGGGGT TTGGAGCAAA TTGAAGTGCT GCGCGGCCCA
GAAGCGGCTC TGTACGGGCG CGCTAATTTT TCTGGAGCGA TTAATTTTGT TTACAAGCGC
CCAGTGCAAA ATAATTATGC AATTGTTAAT AGCAAGTTTG CGAACAACCT ATATCGCACC
TTAGATTTCG AAGGGAATAT AGCGCCCACG AATACGACAG GCTTGCTGTT AACAGCGGTT
AAACAATCCA ATTCGAATAG TGTTGATAAC AATCTAGGTG ATACCACACG AGGCTACGGC
GCCGAGCAAA CCCAAATGCT AAGCCTCGCT GGCACTTGGC AGCCGAGTGA ACACCTCGCT
TTTTATTATC GTGCAACCAA GCAAGACGAT AATGATGGTC ACATACCCGC GTATTTGCAA
AACCGCGAGT TTAACAACTG CTATTTAGAC ACAAGCATTC AATACTATTG TGGTGAATTA
CCTGCACCTA AGGCTGTGGG GTATAACTCG GCGGGCGCAC CTTGGGATCT ATCGCTTGAG
AATACAATAG AGCGTCAACA CCTAGAGGCG AGCGTTACAC AAAATAAATT TGATATAACA
TTTACACATG CGCGCAGCAG TTTAAATAAT GCAACCGGTT TTGACGGTGA CTTATACGAG
CTGCAAGGCG TTTATACCCA ATTAAATAAG CATAGTACCG ACATCACATC GCAGGTTATC
TCTAACATTT ATTTCGATAC TGGGCGTTTA CTTATTGGGG CGTCGCACTA TTCGCTAGAT
AAATTTAACC AAACTAACAA CGCCTTCGAC TTTGGTGGCC CAATTTCGGT TATGGTTGGC
GCGGCACAAT CTGTTTATAT AGATAACACT TCTTTATTCG CTAGCGTAGA TAAAGAACTG
GGTAACGATA TTAAATTAAG CGTAGATGTG CGCTATAGCA AAGATGAAAT TGCCTATAGC
AGTCTTGATA ACGGTGAGAC CTACAGCGAC GCTAATGTTT GGCACAGCGT ATCGCCGCGG
GTAAATGTTT CAAAGTTATT TAACGTGGCA CCGCTAAATA GCCAGTGGCT AGCGTATATT
TCTATGGCGA AAGGGCGTAA GCCTGGTGGC TTTAACGATA ACCTCGAGTC ACTCGCATTC
GAAAACGATA CTGAACGCGC GCGCATACTA GGTTTTAAAA CTTTCGAAGA AGAAACGTTA
ATAAGTTACG ATATTGGTTT GAAAGGTGAG TTAATTGCGA ATAAGGTTTT TTTTAGCACT
AATATTTTTT ACTACGATTG GCAGCAATTA CAGTTAACGC AAAGCCTAAG TTATGTAAAT
GACAGCGCGC AAAATGTACG TGTTACTACC ATTGCCAATG GTGGCAAGTC TCACAACATG
GGTGCGGAGC TAGAGCTAGA AGCGGCTTTG ACTAGCGCTT TCTCTACGCG GTTAAATATG
GGTGTTACCC AAACTGAACT AAAAAATACA GCTACAACAG CGCATTTAGA TTTAACCGGC
AATAGCGATG TAAGCGGAAA CCACATTCCC AATGCGCCTC AGCTAGATGC CTACGTTGGG
CTGTACTACC AACGAGCGCT TGCCAGCAAT TTACACCTTT CACTGAGTAG TACGCTTGCT
TACGAATCTA AGCGCTACGT AGCCGAGCAC AACTTTGCCA CCATTGGCGA TTTTTACCGG
CTTAATCTTA TGGCGAGTAT AGAGCGCGAT AATTGGGGCG TATCGCTATG GGGCAAAAAC
CTTAATAACG ACACCACGCC AGAATCCGCT GCGCGCTTTG GCGATGCCGC TACCTTCTTT
CAAACCAGAG CATTTGGCAT AAGTTTGGCA GAAGAGCGTC AGGTTGGGTT GGGCGTTAGC
CTTAGCTTTC ACTAG
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| Protein sequence | MKRFLNIGIG LLFIFGVSAN AENGPSLLVD MSLEQLLNIP IKTRHFTEQL NSAPRPLSVY
TDSTLHRNLV HSSYDLSLLV PNFSMHRNFG RYQERPVIRG VASIVGESPA GILIDGISVS
NMTQSIPMRG LEQIEVLRGP EAALYGRANF SGAINFVYKR PVQNNYAIVN SKFANNLYRT
LDFEGNIAPT NTTGLLLTAV KQSNSNSVDN NLGDTTRGYG AEQTQMLSLA GTWQPSEHLA
FYYRATKQDD NDGHIPAYLQ NREFNNCYLD TSIQYYCGEL PAPKAVGYNS AGAPWDLSLE
NTIERQHLEA SVTQNKFDIT FTHARSSLNN ATGFDGDLYE LQGVYTQLNK HSTDITSQVI
SNIYFDTGRL LIGASHYSLD KFNQTNNAFD FGGPISVMVG AAQSVYIDNT SLFASVDKEL
GNDIKLSVDV RYSKDEIAYS SLDNGETYSD ANVWHSVSPR VNVSKLFNVA PLNSQWLAYI
SMAKGRKPGG FNDNLESLAF ENDTERARIL GFKTFEEETL ISYDIGLKGE LIANKVFFST
NIFYYDWQQL QLTQSLSYVN DSAQNVRVTT IANGGKSHNM GAELELEAAL TSAFSTRLNM
GVTQTELKNT ATTAHLDLTG NSDVSGNHIP NAPQLDAYVG LYYQRALASN LHLSLSSTLA
YESKRYVAEH NFATIGDFYR LNLMASIERD NWGVSLWGKN LNNDTTPESA ARFGDAATFF
QTRAFGISLA EERQVGLGVS LSFH
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