| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3309 |
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| Symbol | |
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| ID | 3965820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4221368 |
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| End bp | 4221880 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922406 |
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| Product | hypothetical protein |
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| Protein accession | YP_528776 |
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| Protein GI | 90022949 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2980] Rare lipoprotein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0269686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT GCAAACTAAT TCGTTACCGC TTGCTTTGCG TTGTAGCATT AGTGGGCTTA
ACCCTAAGCG CCTGCGGCTG GCAAATACGC GGCAGCGAAA ATATTGCCAG CAACGCCAAT
TTTGAAGGCA ATGCGCTAAG CGTTAAATTT ATGCAGCGCA ACCCAGCGCT AATGCAAGTG
TTGCACAATA CTGTGCGCAG CAACCAACTG GCAATAAATA GCGATGCCAG CACTAAACTG
GTTATAGAGC GCGAGCGCCT AGAGAAACAA TCCCTAGCGG TAACCGAAAC TGGCGTTGCC
GCCCAATACC AACTTATTCT TACTATTCAC TACCACGTGA AAACGGCCGA CAAAACGCTG
GTACCCTCCA ACCAAATATC TAGCTGGCGC AGCTACGACT TCGACGCCAA GCAAATTGCC
GCCAAGTCGC AAGAAGAACA AGCCCTTTTA CTAGAAATGC GTGAAGAGCT GGTAAACCGA
ATGTTGCTGG CCATAAGCGA TAGCGAAAAC TAA
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| Protein sequence | MKHCKLIRYR LLCVVALVGL TLSACGWQIR GSENIASNAN FEGNALSVKF MQRNPALMQV
LHNTVRSNQL AINSDASTKL VIERERLEKQ SLAVTETGVA AQYQLILTIH YHVKTADKTL
VPSNQISSWR SYDFDAKQIA AKSQEEQALL LEMREELVNR MLLAISDSEN
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