| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3281 |
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| Symbol | |
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| ID | 3965773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4190755 |
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| End bp | 4191507 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922378 |
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| Product | hypothetical protein |
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| Protein accession | YP_528748 |
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| Protein GI | 90022921 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0804235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.138859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTG AAAATAAAGT ATGTGTTATC ACTGGCGGTA TTCGCGATAT TGGTAAGCAA
ATTTCTCTTA AATTAGCTTC TGAAGGCGCG AAGTTAGTAA TCAACTACTA CGATAACCCC
GAGCAAGCAG AGCAAACTTT AGCAGACGTT AAAGCTGCTG GTGCAGAAGC TATTCTTGTA
CACGGCGACA TGACTAACGG TGAAGATGTT CAAAAGTTAG TTGATGCTTC TTTAGAAACT
TTCGGTGCTC AAATCGATAT TCTAGTAAAC GTTGCTGGTG GTTTAGTTGC CCGTAAAACT
ATCGACGAGA TGGACGAAGA TTTCTGGAAC TTCCTCATCA AGTTGAACTT GAACACTACT
TTTCTTTTGA CCAAAGCATG TGCTCCACAC ATGGTTAAAG GTAGCTCTAT CATTAACTTC
GCTTCACAAG CTGGTCGTGA CGGTGGTGGC CCAGGTGCTT CTGCTTACGC AACTGCAAAA
GGCGCGGTTA TGACTTTCAC TCGTTCTATG GCTAAAGAAC TTGGTCCACG TGGCATTCGC
GTTAACGCAT TGTGCCCAGG TGTAATCAGC ACTGTTTTCC ACGACACTTT CACCAAAGAC
GAAGTTCGTA AAAACATTCA AGCTGCTACT CCTTTACGTC GCGAAGGTTC TGCTTCTGAA
GTTGCAGATG TTGTTGCGTA CTTAGCGTCT GACGAGTCTT CATTCCTAAC GGGTTTGAAC
ATGGACGTAA ACGGCGGCTT GTACTTCTCA TAA
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| Protein sequence | MKLENKVCVI TGGIRDIGKQ ISLKLASEGA KLVINYYDNP EQAEQTLADV KAAGAEAILV
HGDMTNGEDV QKLVDASLET FGAQIDILVN VAGGLVARKT IDEMDEDFWN FLIKLNLNTT
FLLTKACAPH MVKGSSIINF ASQAGRDGGG PGASAYATAK GAVMTFTRSM AKELGPRGIR
VNALCPGVIS TVFHDTFTKD EVRKNIQAAT PLRREGSASE VADVVAYLAS DESSFLTGLN
MDVNGGLYFS
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