| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3208 |
|---|
| Symbol | |
|---|
| ID | 3965681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 4084188 |
|---|
| End bp | 4085021 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637922305 |
|---|
| Product | mannosyl-3-phosphoglycerate phosphatase |
|---|
| Protein accession | YP_528677 |
|---|
| Protein GI | 90022850 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3769] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01486] mannosyl-3-phosphoglycerate phosphatase family
[TIGR02461] mannosyl-3-phosphoglycerate phosphatase
[TIGR02463] mannosyl-3-phosphoglycerate phosphatase-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG AGGAAAACAC ACAAGCAGCG CCCCATGTCG AATACCTTAT ATCGACAGAT
TTAGATGGCA CCTTGCTTGA TCACCACACC TACAGCTGGG CGGAAGCCAG CCCAGCCATT
AATTTGCTTA AAGAGCACGC CATACCCATT GTTATTAACA CCAGTAAAAC CCGCGAAGAA
GTAATAGCCC TGCAGCAAGA AATAGAGCTG TGCGACCCAT TTATTGTAGA GAACGGCTCC
GCAATATTTA TTCACGCCAA CGACGACCGC TTCGAACGGC GCGGCATGGT GCAGCAAGGT
AACTTGCTAT GTGAAACACT GGGCATTGCC AGAGCAGTGA TTACAGATAA ATTAAAAAGC
CTAAGAGCAG AAACTGGGTT TAAATTTACA AGCTTCAGCG AATTTAGCGT GCAAGACATT
ATTGACCACA CGGGGCTTAG CGAAGCCGGC GCACAACTAG CGCAAAACCG CGCCTACAGC
GAACCGCTTA TTTGGCAAGA TAGCGACGAG AACTTTGATA CATTTAAACA AGCCATATTG
AGTGCGGGTT TTAAAATATT ACACGGCGGC AGGTTTATTC ATATATTGGG CAAAACCAAT
AAGGGCTTAG CCGCGCAAAG TTTAATGCAA CGCATGAAAT ACGAAGGCCA AACGCAAATG
ATAGCCCTTG GCGACAGTGG CAACGACTTA GACATGCTAA ACATTGCCAG CACACCAGTA
CTTATTAAAT CACCGGCGCA TGACTTTCCA AACTGTATTC GCGCCGACGC CATTAAAACC
ACCGCATACG GCCCTAAAGG CTGGAACGAC ACCATTATAG ATTTAATTTT TTAA
|
|---|
| Protein sequence | MNNEENTQAA PHVEYLISTD LDGTLLDHHT YSWAEASPAI NLLKEHAIPI VINTSKTREE
VIALQQEIEL CDPFIVENGS AIFIHANDDR FERRGMVQQG NLLCETLGIA RAVITDKLKS
LRAETGFKFT SFSEFSVQDI IDHTGLSEAG AQLAQNRAYS EPLIWQDSDE NFDTFKQAIL
SAGFKILHGG RFIHILGKTN KGLAAQSLMQ RMKYEGQTQM IALGDSGNDL DMLNIASTPV
LIKSPAHDFP NCIRADAIKT TAYGPKGWND TIIDLIF
|
|---|
| |