Gene Sde_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3181 
Symbol 
ID3965634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4056469 
End bp4057341 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content48% 
IMG OID637922278 
Producthypothetical protein 
Protein accessionYP_528650 
Protein GI90022823 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGT TAGTTATCAG TGGACGATCC GGTTCAGGCA AAACCTCCGC GCTGCACTTG 
CTCGAGGATG AAGGCTTTAC CTGTATTGAC AACTTACCCG TAAAACTTCT ACCCGCGCTA
ATAGAGCAAA TTGGTGATGC ACCCCATGCC AGTAAACACA AATTTGCAAT TGGCATAGAT
GCGCGCAACC TAAACAGCGA TTTAAGCCAA ATCGAATCTC TTATTAAAGA CAACTTGCCC
GCCAATGCGG AGTGCCTGGT TGTGTACTTA GATACCTCGC GCGAAGTGCT ACTTAAACGC
TTCAGCGAAA CTCGACGCAA GCACCCCCTT TCAGACCAAA ACACTGGTCT AAACGAAGCC
ATTGCAAAAG AAAAAGTAAT TTTAGAACCG GTGGCGGCGG CTGCAGACAT TACCGTTGAT
ACTAGCCATA TGTCCTTGCA CGAATTGCGC AGCACCATTA AGCGCTTGGT GGTAGGGGAA
GAAAGCAAAG GCATGGCCAT TATGTTCAAG TCGTTTGGCT TTAAATACGG CGTGCCGGTT
GATGCCGACT TTATTTTCGA TGTGCGCTGC TTACCCAACC CCTACTGGAG CCCCGAATTG
CGCTCTCAAT CAGGTTTAGA GGCGGGGGTT ATCGAGTTTC TGAATTCACA ACAGGAAGTG
GATGACATGT TTGATGATAT TTGCGCATTC GTTCAAAAGT GGGCACCGTC GTTTCAGGCC
AATAACCGCA GTTACCTAAC TGTTGCCATT GGCTGCACCG GTGGCATGCA CCGGTCGGTA
TATTTAGCTG AACGATTAGC GGCTGAGCTA AAGAAAGGTT ATGCTAATGT ACAAACACGG
CACCGCCAAC TAGAACAAAA ACCAGGCGCT TAA
 
Protein sequence
MRLLVISGRS GSGKTSALHL LEDEGFTCID NLPVKLLPAL IEQIGDAPHA SKHKFAIGID 
ARNLNSDLSQ IESLIKDNLP ANAECLVVYL DTSREVLLKR FSETRRKHPL SDQNTGLNEA
IAKEKVILEP VAAAADITVD TSHMSLHELR STIKRLVVGE ESKGMAIMFK SFGFKYGVPV
DADFIFDVRC LPNPYWSPEL RSQSGLEAGV IEFLNSQQEV DDMFDDICAF VQKWAPSFQA
NNRSYLTVAI GCTGGMHRSV YLAERLAAEL KKGYANVQTR HRQLEQKPGA