Gene Sde_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3090 
Symbol 
ID3965471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3942040 
End bp3942432 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content36% 
IMG OID637922187 
Producthypothetical protein 
Protein accessionYP_528559 
Protein GI90022732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAGAAT TTTTGGAGAC TGTAGAAAAT CTAAATTCAC AATATGCTTC TATCGAAATA 
GATGGTGAGT TAGATTCTTT AAGCCACAAT TTCTGGTCAG CCGCTGAAAT TGAAAATGGG
AAAAACGTCC AGGCCGACTG GGATGTTCCT GCTCATCTAA TTCCATTTTA TGGCGATTGG
CACGATCTAT TCTGTTTAGA TTCTGATAGT GGAAAAATTG TATCTCTGAA CGATGAGAGA
GAAATAATAT ATGTGTGGAG TTGCATAAAA GACTTTATAG CATCTTTATC AACGACAGAA
GTTGAGCTTA CAAAAAAGCC AGAGATAGTA AGTTTCAGTC TCTCACCCGA TTTACTTGAG
AAAGCTAATG AGTTCAAAAA GAAAAACACT TAA
 
Protein sequence
MREFLETVEN LNSQYASIEI DGELDSLSHN FWSAAEIENG KNVQADWDVP AHLIPFYGDW 
HDLFCLDSDS GKIVSLNDER EIIYVWSCIK DFIASLSTTE VELTKKPEIV SFSLSPDLLE
KANEFKKKNT