Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2990 |
Symbol | |
ID | 3967751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3800012 |
End bp | 3801256 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637922087 |
Product | cellulose binding, type IV |
Protein accession | YP_528459 |
Protein GI | 90022632 |
COG category | [S] Function unknown |
COG ID | [COG4325] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.99957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000012817 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCAC ACATGAGTAT TGAAGCGATT TTATTTCACA CAAAAAAAGT CACTAAAAAC TTATCGTTCC GCTGTCTGCT ATATTGTGTA TTCGCCCTAA CCGCGTTCTT CACGGGTTCG CTACTAGAAC CTTTTGTGCC TAACGAAATA AAAGACCTTG TTACACCACA GGGCTTAAAA GGGCTTTTAA CCATACTTGC ATCCAGCATG CTTGCTGTAA CCACCTTTTC ACTTTCTATT CTAGTCCAAG CCTATGCCAC AGTGGCTACA ACTGCTACAC CGCGTGCAAG CAAACTCATT ATGGAGAATG ACACAGCGCA AAACGCTCTG GGGACATTTA TCGGGGCCTT TTTATTCAGT GTGATTGGCT TAATAGGGAT AAGCTCAAAC TATTACCAAG AGAATATGGT GGTTGTACTA TTTCTATTTA CCGTAGTAAT GATTTTTTTA ATAATAATTA TGCTGTTGCG ATGGATCGAC CAACTCTCCA AGCTAGGCCG CATAGACGAA ACTATTGACG TACTTGAGCA AGCGCTCGCG GAAGCAATAG ACACACGCAG CAATTTCCCC GCGCTGAACG CCAATATACT AACTCTACCC CAAGAAGATC TAGGCAAAGA TAAATGCAGA ATCTATTCCG CTAAAGTGGG TCACGTACAG CACATCGACC TACCAAAATT AAACGCACTT GCAGCCAAAC TTAATTTAAA AATTTACATT ACTGTAGGGC CCGGAGACTT CGTAGACAGT ATTACCCCAA TGGCGTATAT AGATGGTGAC TGCAGCGAGG AAACCCAGCA ATGTGTAGTA GACGCTCTAA GCATAGGTAA CACGCGAACC TTTTCACAAG ACCCTCGCTA CGGGCTAATC GTACTTTCTG AAATTGCCCT TCGTGCATTA TCGCCCTCGA CGAATGATCC TGGTACTGCA ATTCAAATAC TTAGCAGCTA CGTTAAAGCT ATTAAACTTT GGGATACAAA TACCAGTAAA AACCACAGGT CGCTTAAAAA TGATCGTGCA AGCATTAAAT TTGAACACGT ATATATGTAC CCAATACAGG AGTCAGACCT GTTTGAAGAT ATGTTTGCAG CTTTATTACC CGCAGCGATG CCCCACAAGA TTGTGACTGA TAAAATCAGA AAGTCATTAC TAAGCTTTCA GCAGCTAAAC AATAAAAAAA TTACCGACTG CGCAAACGAT TGGCTTAATA AACTAAACGC GCACAGCAAC AGCCTACGGC ACTAA
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Protein sequence | MKAHMSIEAI LFHTKKVTKN LSFRCLLYCV FALTAFFTGS LLEPFVPNEI KDLVTPQGLK GLLTILASSM LAVTTFSLSI LVQAYATVAT TATPRASKLI MENDTAQNAL GTFIGAFLFS VIGLIGISSN YYQENMVVVL FLFTVVMIFL IIIMLLRWID QLSKLGRIDE TIDVLEQALA EAIDTRSNFP ALNANILTLP QEDLGKDKCR IYSAKVGHVQ HIDLPKLNAL AAKLNLKIYI TVGPGDFVDS ITPMAYIDGD CSEETQQCVV DALSIGNTRT FSQDPRYGLI VLSEIALRAL SPSTNDPGTA IQILSSYVKA IKLWDTNTSK NHRSLKNDRA SIKFEHVYMY PIQESDLFED MFAALLPAAM PHKIVTDKIR KSLLSFQQLN NKKITDCAND WLNKLNAHSN SLRH
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