Gene Sde_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2940 
Symbol 
ID3968030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3736962 
End bp3737393 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID637922037 
Producthypothetical protein 
Protein accessionYP_528409 
Protein GI90022582 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGTT ATTGGCTGTT GTTTGGTAGC GCCTTTATTG CCGCCACTAT TTTCCCTTTT 
TACTCCGAAA TATTGCTCGT TACCCTGCTG GCAGATGGCA AGAATGTCGC CTTGTTGTGG
TTGTTTGCTA CTGCTGGCAA TTCATTGGGG GCAGTGGTTA ATTGGCTGTT GGGCAAGTAT
CTTTTGCGTT TTCAAACTAA GCGTTGGTTT CCTTTTAAGC TAGATCAGTT GGCGCGCTAC
CAGGCGTGGT TTCAAAAATA TGGTGTGTGG AGTTTGTTGC TTGCTTGGAT GCCGTTGGGT
GGTGATGCGC TTACTTTTAT TGCGGGTATG ATGCGGGTTA ACTTTTGGGT GTTTTTTCTG
TTAACGGCTA TTGGAAAGGG GCTTCGATAC GCTGTTGTTA TACTTCTTAC TTTGGGTGTA
ATTCATTTTT AG
 
Protein sequence
MLSYWLLFGS AFIAATIFPF YSEILLVTLL ADGKNVALLW LFATAGNSLG AVVNWLLGKY 
LLRFQTKRWF PFKLDQLARY QAWFQKYGVW SLLLAWMPLG GDALTFIAGM MRVNFWVFFL
LTAIGKGLRY AVVILLTLGV IHF