| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2918 |
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| Symbol | |
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| ID | 3968047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3701369 |
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| End bp | 3703708 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922015 |
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| Product | Cache sensor hybrid histidine kinase |
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| Protein accession | YP_528387 |
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| Protein GI | 90022560 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.618331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTA AAACACGTAT CCTGCTGGCA GTGTTTTTGC TCGAGCTGGC TGGTTACGGC
TTGTTGCTCA TCTATTCGCA CGATACTAGC CGTGATGCGC TGGTGGATAT TCGCGAGCGC
CAGATTCGCG CAACTGTTAA AGATAACTAT CACCGTATAA ATGCCCTTAC AGATTTAATG
GAGCGTAAAG CCATTGAGCT GGCAGAGGTG GGTACGCTTA TGCACACCAT GGCGCAGCAG
CAAGCGCCAA CTGCACTAGA TACAGCGATT CAAAATTACT TAAAAAGCGT GTTTACCCAG
TTTCCGGAAT CGATTGGCGG TGGTTTGTGG TACGAGCCAT ACCAATTTGA CCCCCAGCGC
AGGTTATTTG GCCCCTATGT TTTTTGGAAT GCAAAAAGGG AGGTTGAGTT TACTTGGGAT
TTAAACTCAG ATGAATACAA CTACCCCTCG CAGGAGTGGT ACTTAACCGC ATTGCCCACC
ACATGGCCGC GAGATCAGAC GCGAGAGCGC CGCAGCTACT GGACGGCTCC CTATTGGGAC
GAAGCCGGCT CGAAAGAGCT AATGATGACA GTAGACAGCT TAATGTACTC CCAAGCGGGC
GCCATTATAG GTTTAGCTAC TGTGGATTGG TCGCTAAAGG AAATGACCCA GTTTACGGAA
GCAAACCATA TAACCAGTAA TGCTGAGTCG TTTATCATCG ACTCGCAAAG CGACTTTATT
CTTTCTAATA GTCTGCTACC CAAGTCGGTA ATGACACGCT ATGAGCAGTT GCCGTGGATG
CAGCAATTAA ATATTGATTA TCTTGAAAAA GGCGCGCTCA ACGTAAGCAG TAATGTGAGC
GTGAACGGCG AGGTGTATGA ACTCTATTTT TTGAAAAGCG CCACAGGTTT AGTGTATGGC
GTGCTCATCC CTCAGGCGGA GTTCTACTTA GAAATTGACG AAGCTATGCA TTCGATAATG
CTAAACGGCA TTGTGATGAT TGTATTTTTT ATTGCGTGTA TGTTGATAGC GCTAGAGTTG
CTGCTTAAGC CCTTCCATAG TGTGACTAAA ATTATTCGCG ATAGTATTCA GACAAGCGAC
GACGATCGCA TTACTATTAA GCCCATAGAG TACGACCAGA AAAACGAATT TAGTGCGGTA
GTGGATGCGC TTAACATCGT ATATCACCAA ATAAACCGCT ATACCGACGA GCTGGATCAA
GCCAACAAAG CGAAGACCAC GTTCTTGGCC ACTATGTCGC ACGAGATTCG TACCCCCATG
AATGCTATTT TGGGCTACGC ACAAATACTT ACTTCCGATG CCGATATACC CGATAGCCAT
CAAGATACGC TAAAAGCTAT TGAGGGTGCC GGTAAGCACC TGTTGTCGCT GCTCAACGAT
GTGTTGGATA TAACCAAAAT AGAATCTGGC GGCATGATCC TGTATTACGA AAACGTTTAT
GTGCGGGATA TGATCGAATC CCTAGACAAG GTATTTAGCG TTCGCTGCCA ACAGAAGAAG
CTCGACTGGT CCTCTGAGAT AGATATCCCC GAAGAATATA TCGCCTGTGT AGACCGAGCC
AAGCTCAATC AAATTGCGTT TAACCTATTG GGTAATTCCG TTAAGTTTAC CGAACACGGT
AGGGTGCACC TCGAGGCTGC CATCGAGAAC GACCATCTAA TTTTAACCAT TATTGATACT
GGCCCAGGCA TCACCCCAGA AAACCAACAA AAGCTGTTTA CGCCTTTTTA TCAAGGGCAA
GCGGGGTTTG AGCAGGGCGG TACAGGCTTA GGGTTGGCGA TTATTCAAAA GCTTGTAGAG
TTAATGGGCG GCACCGTAGG TTTAAAAGAT ACCTCTGCAC TTGGCTCTAT ATTTGAGGTG
GATATTCCGC TGAATGGCCC CAACCCCGAT TTAGCGCCAG CCAAGCGAGC GGTTAACGAT
GGCTCTGCCG ATTACTCCAA ATTTGAATTA ACCGCACTCA TTGTCGACGA CGTATCAATT
AACCGCGATA TATTGGCAAA AGTGCTCGAG CGCGTTGGCG TGCGCACTAT GCAAGCCCCA
GATGGCTTAG AAGCGTTAAA TATTCTTAAA AGCGTCGTGC CCGACATATT ATTTGTAGAT
ATACAAATGC CAATAATGGA CGGACTAGAG CTGCTAGAAA ACCTAAAAGA GAAATACCCA
CAGTATCTGC CCTACACCTG CGCAATAAGC GCAAATATAA ACTCGCACAA TAACGATTTG
GTTAAATCTG GTTTTGCCTT TGCGGTGAGT AAACCATTCC AGCTAAAAGA AATTGGCGAT
ATTGTCGATT TTATTGTGCA AGATCAGTTC GGTAACTACA CCACCTTAGA CGACCTATAA
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| Protein sequence | MNIKTRILLA VFLLELAGYG LLLIYSHDTS RDALVDIRER QIRATVKDNY HRINALTDLM
ERKAIELAEV GTLMHTMAQQ QAPTALDTAI QNYLKSVFTQ FPESIGGGLW YEPYQFDPQR
RLFGPYVFWN AKREVEFTWD LNSDEYNYPS QEWYLTALPT TWPRDQTRER RSYWTAPYWD
EAGSKELMMT VDSLMYSQAG AIIGLATVDW SLKEMTQFTE ANHITSNAES FIIDSQSDFI
LSNSLLPKSV MTRYEQLPWM QQLNIDYLEK GALNVSSNVS VNGEVYELYF LKSATGLVYG
VLIPQAEFYL EIDEAMHSIM LNGIVMIVFF IACMLIALEL LLKPFHSVTK IIRDSIQTSD
DDRITIKPIE YDQKNEFSAV VDALNIVYHQ INRYTDELDQ ANKAKTTFLA TMSHEIRTPM
NAILGYAQIL TSDADIPDSH QDTLKAIEGA GKHLLSLLND VLDITKIESG GMILYYENVY
VRDMIESLDK VFSVRCQQKK LDWSSEIDIP EEYIACVDRA KLNQIAFNLL GNSVKFTEHG
RVHLEAAIEN DHLILTIIDT GPGITPENQQ KLFTPFYQGQ AGFEQGGTGL GLAIIQKLVE
LMGGTVGLKD TSALGSIFEV DIPLNGPNPD LAPAKRAVND GSADYSKFEL TALIVDDVSI
NRDILAKVLE RVGVRTMQAP DGLEALNILK SVVPDILFVD IQMPIMDGLE LLENLKEKYP
QYLPYTCAIS ANINSHNNDL VKSGFAFAVS KPFQLKEIGD IVDFIVQDQF GNYTTLDDL
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