| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2902 |
|---|
| Symbol | |
|---|
| ID | 3968070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3680502 |
|---|
| End bp | 3681434 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637921999 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_528371 |
|---|
| Protein GI | 90022544 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2354] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.153256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCAA GTAGTTTTTT CGCCCTGTTA GATGATATTG CAACAGTTTT GGACGATGTT
GCGCTAATGA GTAAAGCTGC CACTAAAAAA ACCGCTGGCG TACTAAGCGA TGATTTAGCC
CTAAACGCCC AGCAAGTAAG TGGTGTGAAG GCAGACCGAG AGTTGCCCGT TGTTTGGGCT
GTGGCAAAGG GCTCATTACT TAATAAAGTG ATATTGCTGC CTTTAGCATT GCTAATTAGT
TTGTTTGCCC CTTGGTTAAT CACCCCGTTA TTGATGATTG GTGGGGCGTA CTTGTGCTTT
GAGGGAATGG AAAAAATATG GGGGTTGTTT TTTCACCCGA AAGAAGAGCT GGAGCGCAAG
CAAAAGCGAA AAACCGTTGC CAATGCACAA GAGTTGCTGG CATTAGAGAA GAAAAAGATT
CGCGGTGCAA TTCGTACAGA TTTTATATTG TCGGCAGAAA TTATTGTTAT TGCTCTGGGT
GTGATGAGTG AGTACTCGTT TGTAAAGCAA TGCTTAGCGC TTAGTTTTGT GGCCATTGGT
ATTACTGTCG CCGTTTACGG TGTGGTGGCT GTTATTGTAA AAATAGACGA TGCTGGCTTG
TTTTTAGCGA ATAAAGCCAG CTTGGTATTG CAAAAGGTGG GAGCTGGGTT GTTGTGGTTC
GCGCCGCAAT TAATGAAAAT GTTGTCAATA CTGGGTACCG CTGCCATGTT CCTTGTGGGC
GGCGGTATTT GGTTTCACGC TATTGCATGG TTGCACCATG TAGATCACTC TATTCATGCC
ACGCTTAGCG GTTGGTTGCA TGGCAATTGG TTTGAAGGCG TCGCTGTGTC GCTGGCGTCG
ATCGTTTGGC AGGGGCTGAT TGGTCTAATT GTTGGGGCTA TTGTATTGCT AATTGTTACG
CTTGTATTTA AAGCGATGGG TAAGGAGCAT TAA
|
|---|
| Protein sequence | MPASSFFALL DDIATVLDDV ALMSKAATKK TAGVLSDDLA LNAQQVSGVK ADRELPVVWA
VAKGSLLNKV ILLPLALLIS LFAPWLITPL LMIGGAYLCF EGMEKIWGLF FHPKEELERK
QKRKTVANAQ ELLALEKKKI RGAIRTDFIL SAEIIVIALG VMSEYSFVKQ CLALSFVAIG
ITVAVYGVVA VIVKIDDAGL FLANKASLVL QKVGAGLLWF APQLMKMLSI LGTAAMFLVG
GGIWFHAIAW LHHVDHSIHA TLSGWLHGNW FEGVAVSLAS IVWQGLIGLI VGAIVLLIVT
LVFKAMGKEH
|
|---|
| |