8 homologs were found in PanDaTox collection
for query gene Sde_2894 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_2894  cellulose binding, type IV  100 
 
 
1029 aa  2127    Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0297101 
 
 
-
 
NC_013440  Hoch_5462  hypothetical protein  25.21 
 
 
1236 aa  98.6  6e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.434669  normal  0.334821 
 
 
-
 
NC_007575  Suden_0109  hypothetical protein  24.06 
 
 
409 aa  95.5  4e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2714  hypothetical protein  23.25 
 
 
783 aa  88.6  5e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2050  membrane protein  23.08 
 
 
786 aa  70.9  0.0000000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.200879  n/a   
 
 
-
 
NC_009783  VIBHAR_02268  hypothetical protein  21.66 
 
 
781 aa  67.4  0.000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_1094  hypothetical protein  21.82 
 
 
395 aa  58.2  0.0000008  Shewanella denitrificans OS217  Bacteria  normal  0.451651  n/a   
 
 
-
 
NC_007984  BCI_0143  ATP synthase F1, alpha subunit  33.72 
 
 
513 aa  44.7  0.01  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  0.100694  n/a   
 
 
-
 
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