| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2878 |
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| Symbol | |
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| ID | 3968104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3645279 |
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| End bp | 3648185 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921975 |
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| Product | histidine kinase |
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| Protein accession | YP_528347 |
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| Protein GI | 90022520 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.799361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0181006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACC ATTCCTTCAA GCCTAAGTGG AGTACATTTT TAACCTGCGC TATTGCCGCT
GCTTCGCTTA GTGGCGCAGC CAACGCCACT GAGTATAACG ACCCATACTG GGCAAGCCCC
AATGCTAATA CCGATTTTGT AGACCATTTC GACAGCCCAA CCCTTAACCG CGAAGCGTGG
CTGGTAGAAA AAGATATTTT TGTAAACGGC GAGGATCAGG ATTACCAAGA TGTAGAATTC
CCTGCTGCAG ATTGGACAAT AGGCACAGCA CAGCCAGATG AAGACGCATT AGATGGCAAA
GCTTTAATTC TTAAAGCGCG CTATATGGAT GGCGAAATAC AAGACTATTA CGGCGGTAAC
GGTAAGCCGC TTTTTATTCG TGCCGGCCGT ATCGAATCGC AAATAACCGA CGCAACAACC
TTTACCTACG GCAAGTTTGA GGCGCGAATT AAAACGCCTC CTGCACGCAA TGCAGAGTTC
CCAGCATGGT GGCTACTGGG TAATTACCCC GACGTAGGTT GGACCGCCTG CCAAGAATTG
GACATTATGG AGTTTACTGG GGCAGAAGCT ACAGCCGTAC CGCAAACCTA TTGGACAGCC
CCCTACCCAG TGCACGGTGG CGTAAGCACA CCTTACACTG ATTTAGGTAT TACCAACCCC
CAAACGGAAT ACGTTACTTA CGGCATAATT AAAACACCCG ATTCCGTAGA ATATTACGTA
AATGGAATAA AAACCCAAAC CTTCTCCCGC GCCAACCAAG GGGATGATCA GCCTTGGCCA
TATGTAACGC CCATGCGCAT GATATTGAAC CACGCCATTA CTCACGCGGA ATGGCCGGCT
GTAGGTAACT ATAATGCTGT AAGCACCGAC CCGTCTGTGC CAAACCGCAC TGGCGCAAGC
TGGCAAGATG CCGAAGGTGT ATGGCAATAC GAATACATAG ACACCGACGC AATGGCTGCC
AATATTGGTC GCGACGGTAC AGACTTTGTA GTGGACTACG TTGCTCACTG GCCCCTACCC
GCCAGCGACC CCATGCAAAA ATACACCGAT GGCAGTAAAT ACAGTTTCTT CCGCAGCGAA
AATAACACTA AGGGCTTTTA CAACCTTAGA GGCTGGTTAG CGCCGGTAGC CGTAACCGCT
GACGACTATC TACGCACCGA TTGGGCAGAC GACGAGCGCG ACCACGCCCC AGATAATGCT
GCCGATGGCT ATGTAGGTTC TAAATGGGCA ACACCTGCCG ACGACAACGC GCACTGGGTA
GAAGTCGATT ACGGTAGCGA CAAACAAATT AGTTATTTAT GGATAGATTG GTCTTGGAAC
TTACCATCGG TGTACGACAT TTTTGGTAAA TCGGAAACCA CAGGTGCCTG GGAACATATT
GTTACATCCA CACAAACTAG CGAAGGCTGG GCAGAGCATA TATTCGATGT AAATAAACCT
TACCGCTACA TTAAGCTTGT TACTCGGGGG CGAATTAATA AAGCAGAACC CATTTGGTTG
CTGGAATTAA AAGCGTTTGA AGATGTAGAA AACATGTACC CCAAACCCGT CATTGCAGGT
ATAGATCGCA GCGAGAATAT TTTAAGTAAT GGCACATTCG ATACCGATTT AAGCAATTGG
GGCACAGAAG CCTACGACGG CTCTGACCCA ACATACACCT CGGTAAATGG CGAAGCCGTT
ATTAGCCTTA CTAACGATGG CGCCAATGCC GGCTCGGTGC AAATGCATAC GTCTAATTTT
GGTTTGCAAA AAGACTATCG CTACACCGTA AGCTTCGATG CAAAAGCAGT TGCTGCGCGT
AATATTCAGA TGCGATTATC TAAAAACGAT TTAAACCCTA ACGCAGAAGG CACCTACTTA
CTTGAAACTA TCGCACTGAG CGAAGCCATG ACCAATTACA GCTTCACCGT GGATTTTACA
GCCATGGATG AAAGTGGTCG CCTCGCATTT TTATTTGGCG AAATGGGGAC AGATACCGTA
ACCATAGATA ACGTAGTAAT AAGTGAAGGC GAATTTATTG GTAGCGGAGA GACACTGGTA
CCAGTTATAG GCCCAAGTAA TTTAATAAGC TACAGCACAG GCTGGGAAAC AGACTGGTGG
GGCGTAGTTG GCCGTATAGC CGATGGCGAT GCAGGATCGA AAGCCAGCGG TAACGATGGC
GAAGCCGAAG GCATGGATTT AGATATTACC GTTAAAATTG AAGAAAGCTT TGAAGTGCGC
GAAGTGTGGA TTTCTGGTGA CAATTCGCCA GACCGTAGCC TTGATCAATT TAAAGTGGAA
TATGGCGATG GCACAACCCT TATTGACTGG ACACCAAGCA CCACCGACGG TACCTACGAA
ATATTTAATA CCTTCGCTAA TACTCCCGAC GTTGGCGAGC GCGATTTTAA ATTCTATTTC
CGCCCACCGT CAGGCCAGCT TGTTGAAGTA GGTAATGTGC AATTAATGGC CGTAGATTTA
ATGCCCCACC GAATATCGAG CGTTGCCCTC GATGAAGGCG CAGTAATTAG CCCAGCAGAA
ACATTGCGGT ATAGCAATAC CAATACCGAC GACGCCACCT ACACCTTTAG CGCACCCGAA
GGCAGAACAG TAAACAATGT GATTATTGAT GGCGAGTCTA AAGGCGCTAT TACCGAATTC
ACTTTTACCG ACATTTCTGC AAGCCACGTA ATTGCTGTGG GCTTATCACC TGCTGTTGTT
GAAGACGAAG AAGAGGAAAC CGAAGAACCC GAAACAGAAG AGCCAGAAAC CGAGCAGCCA
GAAACAGAAG AACCTGAAAC TGAACAGCCA GAAGAGAACA ACGGCGGCGG CAATAAAAAG
TCGGGTGGCG GCAGCTTAGG TTGGTTCGCA CTATTAACCT TGCTAGGGCT AAGGATAAGG
AAAAGACAGC TAACAGCTAA CAGCTAA
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| Protein sequence | MNNHSFKPKW STFLTCAIAA ASLSGAANAT EYNDPYWASP NANTDFVDHF DSPTLNREAW
LVEKDIFVNG EDQDYQDVEF PAADWTIGTA QPDEDALDGK ALILKARYMD GEIQDYYGGN
GKPLFIRAGR IESQITDATT FTYGKFEARI KTPPARNAEF PAWWLLGNYP DVGWTACQEL
DIMEFTGAEA TAVPQTYWTA PYPVHGGVST PYTDLGITNP QTEYVTYGII KTPDSVEYYV
NGIKTQTFSR ANQGDDQPWP YVTPMRMILN HAITHAEWPA VGNYNAVSTD PSVPNRTGAS
WQDAEGVWQY EYIDTDAMAA NIGRDGTDFV VDYVAHWPLP ASDPMQKYTD GSKYSFFRSE
NNTKGFYNLR GWLAPVAVTA DDYLRTDWAD DERDHAPDNA ADGYVGSKWA TPADDNAHWV
EVDYGSDKQI SYLWIDWSWN LPSVYDIFGK SETTGAWEHI VTSTQTSEGW AEHIFDVNKP
YRYIKLVTRG RINKAEPIWL LELKAFEDVE NMYPKPVIAG IDRSENILSN GTFDTDLSNW
GTEAYDGSDP TYTSVNGEAV ISLTNDGANA GSVQMHTSNF GLQKDYRYTV SFDAKAVAAR
NIQMRLSKND LNPNAEGTYL LETIALSEAM TNYSFTVDFT AMDESGRLAF LFGEMGTDTV
TIDNVVISEG EFIGSGETLV PVIGPSNLIS YSTGWETDWW GVVGRIADGD AGSKASGNDG
EAEGMDLDIT VKIEESFEVR EVWISGDNSP DRSLDQFKVE YGDGTTLIDW TPSTTDGTYE
IFNTFANTPD VGERDFKFYF RPPSGQLVEV GNVQLMAVDL MPHRISSVAL DEGAVISPAE
TLRYSNTNTD DATYTFSAPE GRTVNNVIID GESKGAITEF TFTDISASHV IAVGLSPAVV
EDEEEETEEP ETEEPETEQP ETEEPETEQP EENNGGGNKK SGGGSLGWFA LLTLLGLRIR
KRQLTANS
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