| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2872 |
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| Symbol | |
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| ID | 3968098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3633897 |
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| End bp | 3636530 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921969 |
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| Product | hypothetical protein |
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| Protein accession | YP_528341 |
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| Protein GI | 90022514 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.44334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.168301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA ATAAGAATAA ATTAATTAAA CATTTGCACG TCTCGCTACT TGGCGTGATG
GCAACAGGTG CTACTGCGGC GTTACCCGAT TGGAGTGATG CCGGCTATCT AAACGGGGCT
GGGTTACCTA GTGCCTCAAG TTTTACAACC AATAATAATT GTATTGTTAC AGCCAGCGAA
TTGAGTAGTG GTTTTGGCGT ATACGCAAAT GATGGCGCGG ACGATTCCGC GGGGTTGCAA
GCCGCAGTCG ATTATATTGG CGCTAACTGT GCGGGCAATT ATCAAAACCT ATCTCGTATT
GAGTTACCCT CTGGCGAGCT AAATATAAAT ACAGAAATTC ATGTAGATAC CAGCTTTTTG
GTTATTCGCG GTAAGGGTAA TAACCCAAGC GCCAGCACTG CCACACGCAT AGTATTTACA
CCGAGCAACG ATACCGCGTA TTTAGGCATG AGTGATTTTG ATTTAAACGA CCTAACCGAT
GCTGGCGGTG GCAAGGGCGG TTGGATTTGG CCTGGCCGAG GAGCCTTTAG AGTGCAAACT
CGCGGTGTGC ATTCATCCTA TGCTAATAGC TATAACACTG CCCCTGCAAA CCGCAAAGAT
TTTTACGAAG GCTCGGTGAA TTTTCACTGG AAGCATAAAA ATGTAACCGC CAGCGCAAGC
GTGGGTGACA CCACTATAAA AATACAAGAT GTGTCTAATT TTAACGTAGG TGGCTATGTG
TGGGTTGGCG CTGCAAATAC CCATAAAATG TACGATCAAC AAAACGTGCA AAACGCCGAT
CGTATTAATA TGCATATGCG CCAACAAATT TTTAAAGTAT TGGCCATTAA TAGCAGCAAC
AAAACGTTAA CGCTTGATAA ACCACTTGAG TTTGATTTAC CGGTTAATAG CACCGGTGAC
GGTTCTAGCG CAATATCCGG CTCGTACAAT AGTCGCGCTG TAGCGTTAAC AATGGTTGAA
GGTGTTGGTT TCGAAAACTT CTATCTCACC CAAACCGGGC CGAGTGGTTA CACTGCGCAA
GATGCAAAAC ATAATTACAA CAACCTAGAT CACCAGCGCG CAATGATGGG CATAGTGTTT
AAATGGGCTG CTAACAGTTA TGTATCGAAC GTGCGAACCT TTATGACTGG TTCGCACCCG
CTTGTAACTG AAATGGCCAT TAATTTGCAG TTCGAAAATA ATTATTTAGA AGGCTCGTGG
AATAAAGGCA AAGGTGGTAA TGGCTATGTG CGCGGCAGCA AACTGTGGCG CAGCTTAATA
AAAAATAATA CCTTGCGCGA CTTGCGTCAT TTAACGCTGC AGTGGTCTGC TTCGGGCAAT
GTTATTACAG GCAATAATAT AGATGCCGAT ATAAATTTGC ATGGTGGCTG GGAACGCAAC
AACCTAATAG AGAACAATAC GGTAGCAGTG CCGTACCACC ATCGAGATTG CAACCCAGGT
TGTGGGGCTG GTGATGGTAC TTGGTACCCC ATTTGGTGGG CAGCAGGTTA TCATGCAGGC
GGTTGGAGCG GCGCGAGCGG CCCACGCAAT GTGTTTTTCT CAAATTCCAT GAGTAAGCAA
ACAAGCGAAG GCGGGCCTTT TGAACCCTAT GGCCCTTACG GCAACAACAA TAATACGGTG
TACCAATTTG GCTGGGATGC AAACGGTGAA GGTTCACAGT GGGTGCACCT TGCGCTGGGA
GACGAGTTAA TTTCTACGTG GACACACAAC GAAACTAAAG ATTACACGGC CCTACCCAAT
GTAGGGGTAA ACGCAAACTG CACTTATTCT GGTGCTTCTT TGGTGTCGGC GGTCGATGCG
ATAAGTTGCA GTGGTAGCGG CTCTTCCAGT TCCAGCTCTT CTAGTAGTAC AAGCTCTACT
TCTAGTTCTA CATCAAGCTC ATCCTCTAGC TCGAGCAGTT CCAGTGGCGG TGCCGGCGGT
TGTGTGAATT TTATTAATTT AAGTTGGAAT CAAAAAACCG AAATAAATGT GGGCAATGGT
GAAAACTGTA TTCGCGTAGA CCGTAACCTA GCTGGCAACG CTATTAGATT TTGGGATAGT
GACACCCATA GCGTGTGTAA TTTTCGCGGT GTTGCAACCT CGGTAAACGG CAGTGGCAGC
CTTTCTATTA ATAGCAATTA TATAAATAGC TCAGCGTTTA GCGGTACCGT AGTAATGCTT
ACCCCAAGCG CCAACGAAAA TTGCCCGTAT ATAAAAGTGC AGGCATATGG CAGTGCAAAT
ACGGGTAGCA GTTCCAGCTC GTCGTCTAGC TCTAGCAGCA GTTCAAGTAC ATCTAGCAGT
TCGAGTTCAT CGTCTTCATC TAGTTCGTCG TCTTCTAGCA GTTCGTCATC TGGCGGTGGC
GTGTGCGCTA GCTATACCGA TGTGGCAATG AAAACAGCTA CAGAAATAAC GCTAAATGGT
GGAACTAACT GCGTTCGCTT TCCAGAAAAC CTAAGCGGTA ATACGGTACA GTTTTGGGAT
AGCGAATCGA ATACCTCCTG CGACTTCCGC GGTACAGTGC AAGCTGTTGA TGGCAGTGGA
GCGGTGTCTA TAACATCTAA CTACAAAGCG AGCTCGTCGT TTACGGGTAG GGTGTTGCGG
TTAACTTCTA GTGCAGGCAA TGCGTGCGAT TATATACGTG TACGAGCGTA CTAA
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| Protein sequence | MKINKNKLIK HLHVSLLGVM ATGATAALPD WSDAGYLNGA GLPSASSFTT NNNCIVTASE
LSSGFGVYAN DGADDSAGLQ AAVDYIGANC AGNYQNLSRI ELPSGELNIN TEIHVDTSFL
VIRGKGNNPS ASTATRIVFT PSNDTAYLGM SDFDLNDLTD AGGGKGGWIW PGRGAFRVQT
RGVHSSYANS YNTAPANRKD FYEGSVNFHW KHKNVTASAS VGDTTIKIQD VSNFNVGGYV
WVGAANTHKM YDQQNVQNAD RINMHMRQQI FKVLAINSSN KTLTLDKPLE FDLPVNSTGD
GSSAISGSYN SRAVALTMVE GVGFENFYLT QTGPSGYTAQ DAKHNYNNLD HQRAMMGIVF
KWAANSYVSN VRTFMTGSHP LVTEMAINLQ FENNYLEGSW NKGKGGNGYV RGSKLWRSLI
KNNTLRDLRH LTLQWSASGN VITGNNIDAD INLHGGWERN NLIENNTVAV PYHHRDCNPG
CGAGDGTWYP IWWAAGYHAG GWSGASGPRN VFFSNSMSKQ TSEGGPFEPY GPYGNNNNTV
YQFGWDANGE GSQWVHLALG DELISTWTHN ETKDYTALPN VGVNANCTYS GASLVSAVDA
ISCSGSGSSS SSSSSSTSST SSSTSSSSSS SSSSSGGAGG CVNFINLSWN QKTEINVGNG
ENCIRVDRNL AGNAIRFWDS DTHSVCNFRG VATSVNGSGS LSINSNYINS SAFSGTVVML
TPSANENCPY IKVQAYGSAN TGSSSSSSSS SSSSSSTSSS SSSSSSSSSS SSSSSSSGGG
VCASYTDVAM KTATEITLNG GTNCVRFPEN LSGNTVQFWD SESNTSCDFR GTVQAVDGSG
AVSITSNYKA SSSFTGRVLR LTSSAGNACD YIRVRAY
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