Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2828 |
Symbol | |
ID | 3968231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3567099 |
End bp | 3568595 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921925 |
Product | tryptophan halogenase |
Protein accession | YP_528297 |
Protein GI | 90022470 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000300055 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0040734 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAA ATAAAATTAA AAAAGTGGTC ATCGCAGGTG GCGGCACAGC AGGTTGGATG GCCGCAGCGG CCATATCTAA GTTACTCGGT AAAAACCTCG ATATTAGTTT AGTGGAATCC GATCAGATTG CCACGGTAGG GGTGGGTGAG GCTACCATTC CCGCGTTACA AACATTCCAT AAGTTGTTGG GCATTAAAGA ACCGCACTTT ATGGCTGCCA CCCAAGCAAC CTTCAAACTG GGTATCGAAT TCAAACGTTG GAAGGATACC CAGTCGAGCT ACATTCATTC GTTTGGCGCA GTAGGTAAAG ATTGTTGGGC CGCAGGCTTC CAACATTTTT GGCGGCGGGG AGTAGACTTA GGCGTTAACC ACGATTACGG CGATTATTGC TTAGAGCTAG AAGCCGCCAA ACAAAATAAA TTTGCCCACC CCAATAGCGG CAATATTTTT TACGCCTACC ATTTAGATGC AACCCTGTAC GCTAAATATC TGCGTAAATT CAGCGAAACC TTTGGCGTAA AACGTATAAA GGGTAAAATT GTTGAAGTTA AAACACACTT ACATAACGAT TATATTAAAT CGTTAGTGTT AGAAAGCGGC CAAGAAGTAG AAGGCGATTT ATTTATAGAT TGCACAGGTT TTATTGGCCT ATTAATAGAG CAAACATTGC AAACCGGTTA CGAAGACTGG TCCCACTGGT TGCCCTGCGA TAGCGCAGTG GCAGTGCAAA CAGCAGCAAC GCAAGCGCCC ATACCTTATA CCCGCTCTAC TGCTCACGCT GCCGGCTGGC AGTGGCGTAT ACCGCTGCAG CATAGAGTGG GAAACGGTTT AGTGTATTGC AGTAAACATA TTAGCGATGA AGAAGCTAAG CAAACACTAT TAAATAATAT TGAAGGCGAA CTGCTAACAG AACCAAGAGT AATTAAATAT CGCACGGGCC AGCGTTTAAA ACACTGGAAT AAAAACTGCG TTGCATTAGG GTTGGCAAGC GGCTTTATCG AGCCTCTTGA ATCTACAAGT ATTCATTTAA TACAGCGCGG CATTTTGCGA CTGCTTTTTT TGTTCCCTTC GAATGGAATA AACGATACCG ATGTGGCTGA ATACAATCAG CAAACTAAAG CAGAGATTGA GCATATACGC GATTTTATTA TTTTGCATTA TCACGTAAAC CAGCGTAACG ATTCGCGGTT TTGGCGCTAC TGCGCAAATA TGTCTATACC CGAAACACTC GCGCACCGTA TCAGTCTATT TAAAAAATCT TCTCGATTTT ACCCAAAAGA CGATGAGCTA TTTGGCGAGT ATTCCTGGGT GCAAGTCATG TTGGGGCAGG GCATAGAGCC AGAGGGGTAT CATCCTATTG TGGATATGAT GTCTGAGGAT GAGCTTCATC ACTTTTTAAA AAATATTCGG AGTTCGGTTC AGCAGGCACT TGCCAGCATG CCGCAGCACA CCGATTACAT TCAGCAGTAT TGCAAAGCGC CACCCATACC TATCTAG
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Protein sequence | MKQNKIKKVV IAGGGTAGWM AAAAISKLLG KNLDISLVES DQIATVGVGE ATIPALQTFH KLLGIKEPHF MAATQATFKL GIEFKRWKDT QSSYIHSFGA VGKDCWAAGF QHFWRRGVDL GVNHDYGDYC LELEAAKQNK FAHPNSGNIF YAYHLDATLY AKYLRKFSET FGVKRIKGKI VEVKTHLHND YIKSLVLESG QEVEGDLFID CTGFIGLLIE QTLQTGYEDW SHWLPCDSAV AVQTAATQAP IPYTRSTAHA AGWQWRIPLQ HRVGNGLVYC SKHISDEEAK QTLLNNIEGE LLTEPRVIKY RTGQRLKHWN KNCVALGLAS GFIEPLESTS IHLIQRGILR LLFLFPSNGI NDTDVAEYNQ QTKAEIEHIR DFIILHYHVN QRNDSRFWRY CANMSIPETL AHRISLFKKS SRFYPKDDEL FGEYSWVQVM LGQGIEPEGY HPIVDMMSED ELHHFLKNIR SSVQQALASM PQHTDYIQQY CKAPPIPI
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