Gene Sde_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2758 
Symbol 
ID3968354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand- 
Start bp3495695 
End bp3496243 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content49% 
IMG OID637921858 
Producthypothetical protein 
Protein accessionYP_528230 
Protein GI90022403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.787221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00175063 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCAAGC TTAAACGCCT TGTCGAAAAC TATGGCAACT ACATCGCAAC ACCCTGGAGT 
GAAGCGGCAG CAGCTCAGCG TGTCATTTTC TGTGTGTATA ACGAGAATGA TGAGCTTCGG 
CTTCGGGTCT CCATTGATGA GTTTGAACTG GCAACCAAAG CAAAGGGCCA TCAATGGTGT 
CACTTTGATC TTACCAATAC CTTTGCTGAT TGGTTGGCAA GTCAAAAATA TGCCAAGAGC 
TATTTTCAAA AACCTCAGCT GATCAACACG CTACTGCCAA AATACGCCGA ATACATCGCC 
GCTCAGTTTA AAGAGCACAT TGCCAGCGCC GGAGCCGACA ACAGCACCGT CGTTGCCGTG 
TCAGGGGTGG GCAGCTTATT CGGTTTTCAA AAGGTGAAAG ACATCGTCGA TAAGCTAGCG 
CCAATGGTGC CTGGCCGCCT GCTGGTGTTT TTTCCTGGCA GCTACGAAAA CAACAATTAC 
CGATTGCTCG ATGGTTACGA CGGCTGGAAC TACCTCGCCG TGCCAATCAC CGCCGAAAAG 
ATTTATTAA
 
Protein sequence
MSKLKRLVEN YGNYIATPWS EAAAAQRVIF CVYNENDELR LRVSIDEFEL ATKAKGHQWC 
HFDLTNTFAD WLASQKYAKS YFQKPQLINT LLPKYAEYIA AQFKEHIASA GADNSTVVAV 
SGVGSLFGFQ KVKDIVDKLA PMVPGRLLVF FPGSYENNNY RLLDGYDGWN YLAVPITAEK 
IY