Gene Sde_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2660 
Symbol 
ID3968479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3375187 
End bp3376476 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content43% 
IMG OID637921758 
Productribosomal protein L31 
Protein accessionYP_528132 
Protein GI90022305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.100588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCT TTTCAATTCG TGTAACCCGC GTGTATATAT TTATATTGTT GGTGCTGGCT 
TTGCCTGCGT GTGCAGATGG TGCAAGCAAC ACAAGCAAAG CAAGCAATAA TAGTGATGAG
CGATATTATG ATCTTACTTA CCATGTGGTA TTACACCCTG AAACCTCATC GGCAAAGGTG
CGTATTGAAA TCGCCAATGC GCGAGATTTA GTCTGGCTAG ATTTTAATAT CGACAAAAAA
TATCACACCA ATTTTACCGG TAACGGTGAA CTAACCGTTG CGGAAGGTAA TGTTAAGTGG
GTGCCGCCAG CAAAAGATGC GATGCTTACT TACGATGTAG CCATTAATCG AGCACGTAAA
AAAGAATCTG GTGGTAAGCA GTACGACGCT TATATTTCAC CGCAATGGGC AATATTTCGC
GGGGATGACT TAATTCCATC TGCAAGAGTG AGAGCAAAAA AAGGGGCTAA ATCAAAATCT
GTGTTAGTGT TTGATTTACC TGAAAATTGG AGCAGTGTTA ATTCTGGTTG GCCCAAAGCG
TTGGATCACA GTGAAAGCGA TGCGTATATT ATCGATAACC CTAGTCGACG TTTTGATAGG
CCTATAGGCT GGTTTATTGC TGGGGATTTA GGTACGCGAC GCGTAAAGCT AGGCGAGACA
TACCTTTCGG TTAGCGCGCC TAAAGAGAGT GAATTTAGGC GCATGGATAT TCTAACCATG
CTGACTTTTG TTTGGCCGCA GGTGACCAAC ACTTTTGAGG TTACCCCCGC CAAAATTCTT
ATAGTGGGTG CAGGTAAGCC CATGTGGCGT GGCGGGCTTT CGTCTCCTAA TTCGCTATAT
TTACACGAAG ACCGCCCTCT AGTAAGTGAG AATGGCACGA GCACTATCTT GCATGAAATA
TTTCACGTGG TAAGCGGTAT TTCTGGGGAT AAAAATAACG ATTGGGTAGC TGAAGGCTTG
GCCGAGTTCT ACGCAATAGA GTGGTTGTAC CGTGCAGGAG GCTTAACCGA CACAAGGCGC
AACATTGTAT TAGCCGATCT AGAAAAGTGG TCAAAAAATG TAACCACGCT ACTAGGTAAA
AACTCAACCG GTGAAGTAAC GGCAAAGGCG GTACTCTATT TCGAGGAGTT AAACAATAGG
CTGCTAAAGA AAAGTAAAGG GTCCGTTAAT TTAGATGCGT TTGTAGCGGA GGTGTTTGAT
AACAAAAAGA TAACAGTTGA AACCATCAAT ACCCTTTGCA CTAATTATGA AATTGAATGC
CCCGCAGTTA CATTTAAAGT TAAGGACTAG
 
Protein sequence
MALFSIRVTR VYIFILLVLA LPACADGASN TSKASNNSDE RYYDLTYHVV LHPETSSAKV 
RIEIANARDL VWLDFNIDKK YHTNFTGNGE LTVAEGNVKW VPPAKDAMLT YDVAINRARK
KESGGKQYDA YISPQWAIFR GDDLIPSARV RAKKGAKSKS VLVFDLPENW SSVNSGWPKA
LDHSESDAYI IDNPSRRFDR PIGWFIAGDL GTRRVKLGET YLSVSAPKES EFRRMDILTM
LTFVWPQVTN TFEVTPAKIL IVGAGKPMWR GGLSSPNSLY LHEDRPLVSE NGTSTILHEI
FHVVSGISGD KNNDWVAEGL AEFYAIEWLY RAGGLTDTRR NIVLADLEKW SKNVTTLLGK
NSTGEVTAKA VLYFEELNNR LLKKSKGSVN LDAFVAEVFD NKKITVETIN TLCTNYEIEC
PAVTFKVKD