Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2660 |
Symbol | |
ID | 3968479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3375187 |
End bp | 3376476 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637921758 |
Product | ribosomal protein L31 |
Protein accession | YP_528132 |
Protein GI | 90022305 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.100588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCTCT TTTCAATTCG TGTAACCCGC GTGTATATAT TTATATTGTT GGTGCTGGCT TTGCCTGCGT GTGCAGATGG TGCAAGCAAC ACAAGCAAAG CAAGCAATAA TAGTGATGAG CGATATTATG ATCTTACTTA CCATGTGGTA TTACACCCTG AAACCTCATC GGCAAAGGTG CGTATTGAAA TCGCCAATGC GCGAGATTTA GTCTGGCTAG ATTTTAATAT CGACAAAAAA TATCACACCA ATTTTACCGG TAACGGTGAA CTAACCGTTG CGGAAGGTAA TGTTAAGTGG GTGCCGCCAG CAAAAGATGC GATGCTTACT TACGATGTAG CCATTAATCG AGCACGTAAA AAAGAATCTG GTGGTAAGCA GTACGACGCT TATATTTCAC CGCAATGGGC AATATTTCGC GGGGATGACT TAATTCCATC TGCAAGAGTG AGAGCAAAAA AAGGGGCTAA ATCAAAATCT GTGTTAGTGT TTGATTTACC TGAAAATTGG AGCAGTGTTA ATTCTGGTTG GCCCAAAGCG TTGGATCACA GTGAAAGCGA TGCGTATATT ATCGATAACC CTAGTCGACG TTTTGATAGG CCTATAGGCT GGTTTATTGC TGGGGATTTA GGTACGCGAC GCGTAAAGCT AGGCGAGACA TACCTTTCGG TTAGCGCGCC TAAAGAGAGT GAATTTAGGC GCATGGATAT TCTAACCATG CTGACTTTTG TTTGGCCGCA GGTGACCAAC ACTTTTGAGG TTACCCCCGC CAAAATTCTT ATAGTGGGTG CAGGTAAGCC CATGTGGCGT GGCGGGCTTT CGTCTCCTAA TTCGCTATAT TTACACGAAG ACCGCCCTCT AGTAAGTGAG AATGGCACGA GCACTATCTT GCATGAAATA TTTCACGTGG TAAGCGGTAT TTCTGGGGAT AAAAATAACG ATTGGGTAGC TGAAGGCTTG GCCGAGTTCT ACGCAATAGA GTGGTTGTAC CGTGCAGGAG GCTTAACCGA CACAAGGCGC AACATTGTAT TAGCCGATCT AGAAAAGTGG TCAAAAAATG TAACCACGCT ACTAGGTAAA AACTCAACCG GTGAAGTAAC GGCAAAGGCG GTACTCTATT TCGAGGAGTT AAACAATAGG CTGCTAAAGA AAAGTAAAGG GTCCGTTAAT TTAGATGCGT TTGTAGCGGA GGTGTTTGAT AACAAAAAGA TAACAGTTGA AACCATCAAT ACCCTTTGCA CTAATTATGA AATTGAATGC CCCGCAGTTA CATTTAAAGT TAAGGACTAG
|
Protein sequence | MALFSIRVTR VYIFILLVLA LPACADGASN TSKASNNSDE RYYDLTYHVV LHPETSSAKV RIEIANARDL VWLDFNIDKK YHTNFTGNGE LTVAEGNVKW VPPAKDAMLT YDVAINRARK KESGGKQYDA YISPQWAIFR GDDLIPSARV RAKKGAKSKS VLVFDLPENW SSVNSGWPKA LDHSESDAYI IDNPSRRFDR PIGWFIAGDL GTRRVKLGET YLSVSAPKES EFRRMDILTM LTFVWPQVTN TFEVTPAKIL IVGAGKPMWR GGLSSPNSLY LHEDRPLVSE NGTSTILHEI FHVVSGISGD KNNDWVAEGL AEFYAIEWLY RAGGLTDTRR NIVLADLEKW SKNVTTLLGK NSTGEVTAKA VLYFEELNNR LLKKSKGSVN LDAFVAEVFD NKKITVETIN TLCTNYEIEC PAVTFKVKD
|
| |