| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2590 |
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| Symbol | |
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| ID | 3968640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3285312 |
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| End bp | 3286712 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921688 |
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| Product | peptidase RseP |
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| Protein accession | YP_528062 |
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| Protein GI | 90022235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0359861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCTTG TACAGTATGT GCTTACTTTG GAATGTATTT GGAACAATTA CGTGGTATCT
AGTTTGAGTA CGCTTCTGTG GTTCTTAATA GCAATTAGTA TTTTGGTTGC TATCCATGAA
TACGGCCATT TCTACGTGGC CAGACGTTGT GGCGTAAAGG TTCTACGATT CTCTATTGGG
TTTGGGCCGA GACTGTTAAC CTGGACCGAT AAAAAAGGTA CCGAGTTTGC CTTGTCTGCC
ATCCCATTGG GTGGCTACGT AAAAATGCTC GATGAGCGTG AAGGCGAAGT AGATGAAGCC
GAGCGCCCCT ACGCGTTTTC AAGTAAAAAG CCGTGGCAGC GTATTTTAAT TGCTTTTGCT
GGCCCCCTCG CCAATTTTAT TTTCGCCATA CTGCTGTTCT GGCTAATCGT AGCTGTGCGC
GGCGAGTTTC AGATGTTTCC CGTGGTTGGT GAAGTGAAGC CCAATTCTGT CGCAGCGCTG
GCAGGCTTGG AGGCAGGGCA AGAAATTCTT GCGATAGATG GCGAGCCCAC ACCTTCAACA
GAAGCGGTTT TGCATCATCT TATTTCGCGC TTAGGTGAAA CTGGGCCAAT TACTTTTACC
GTAAGCTACC CAGATTCCAC CTTGCAATAC GAATCTCAAG GGCAGCTTCA TGAATGGCTG
CGCGATGCGG AACAGCCGGA CCCAATTGAA GGTATAGGTA TTGTTTTTTA TCAGCCGCCT
GCTGTCATTA GCGAGGTGAC AGAGGGTAAG CCTGCATTTG ATGCGGGCTT CGAAGCGGGT
GATATTGTTG TCGCTACCGA TGGCATTCCT ATGGGAAGCA GCCGCAAGTG GACCACTTAT
ATATCCGAGC GCCCTAATCA GGAGCTTGAG GTTGAAGTAG AGCGTGCTGG TGAAATCATT
GCGCTAAAAG TCACCCCGGC ACAAGAAACC AGCGAAGATG GTAAAACGGT GGGGCGCATA
GGTGTTGGAG TAACCACTAA CTACAAAGGC TCTTACCGCA GAATAGAATA CGGCCCCGGT
GAAGCATTTG TTCGAGGCGT GCAAAAAACA TGGGAAACAG TCGATTTTGT CTTGCTTTCC
ATAAAGAAGC TCATTTTAGG TGAAATCTCC ACTAAAAACT TGAGTGGACC GATAGGCATT
GCTAAAGTTG CCGGCGATTC CGCGAAGGCG GGTAGCTGGG CATTTGTTAG CTTCCTCGCA
ATGATTAGCG TTTACCTTGG TGTACTCAAT TTATTGCCCG TTCCAGTATT AGATGGTGGG
CATATCTTGT TCGGGCTTAT CGAGTGGGTG AAAGGTAGCC CGTTATCTGA ACGAGTTCAG
GCATTAGGCT ATCAGGCAGG GCTGGCTATG GTTCTGTGTT TGATGGTGGT GGCCTTTTAT
AATGATTTGG TGCGTTTGTA G
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| Protein sequence | MILVQYVLTL ECIWNNYVVS SLSTLLWFLI AISILVAIHE YGHFYVARRC GVKVLRFSIG
FGPRLLTWTD KKGTEFALSA IPLGGYVKML DEREGEVDEA ERPYAFSSKK PWQRILIAFA
GPLANFIFAI LLFWLIVAVR GEFQMFPVVG EVKPNSVAAL AGLEAGQEIL AIDGEPTPST
EAVLHHLISR LGETGPITFT VSYPDSTLQY ESQGQLHEWL RDAEQPDPIE GIGIVFYQPP
AVISEVTEGK PAFDAGFEAG DIVVATDGIP MGSSRKWTTY ISERPNQELE VEVERAGEII
ALKVTPAQET SEDGKTVGRI GVGVTTNYKG SYRRIEYGPG EAFVRGVQKT WETVDFVLLS
IKKLILGEIS TKNLSGPIGI AKVAGDSAKA GSWAFVSFLA MISVYLGVLN LLPVPVLDGG
HILFGLIEWV KGSPLSERVQ ALGYQAGLAM VLCLMVVAFY NDLVRL
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