Gene Sde_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2582 
Symbol 
ID3968632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3277048 
End bp3277599 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID637921680 
ProductTonB-like 
Protein accessionYP_528054 
Protein GI90022227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA AATCACGAGT AACCACTTTT GATTCTCTGG CCAACCCAGC AATTTCTACC 
CTTGGGTTGT TTGTTGACCC TTGGTTGAAA GTTTATAACT CATGGGTAAC AAATTTATTG
GGTGATGAGG ATTCGCTGAT GCGTCGATAT ATACGTCATC CGTCCGATAT TCCGATTGCA
TTCTCTGTTG AAACGTTTGA TGCAGAGGCT AGCCCGCGCC CTAGGCTGAA AGATGTAAGC
TTAGGCGGGC TATGTTTTAG CGCCGATTGT CCACTTAAAA CGGGCATGCC AATACACATT
GAAATTCCAG TCGAAAATCA GGGCTTTGGC GCTGATGGTA TCATCGCTTG GTGCCGACCT
GAAGGGCAGA AGTACTCAGT AGGTGTACAG TTTACCGATT CTACTACGCA GTTTTCAGTG
CGCATGGTTG AGCAGATTTG CCATATCGAG CATTATCGTG CAGAAGTGTT ACGGGTAGAA
AACCGCGATT TAACCAGCGA AGAAGCTGCA AAAGAGTGGG TTGAAAAGTT CGCGGCGGAT
TTCCCAAGCT GA
 
Protein sequence
MDAKSRVTTF DSLANPAIST LGLFVDPWLK VYNSWVTNLL GDEDSLMRRY IRHPSDIPIA 
FSVETFDAEA SPRPRLKDVS LGGLCFSADC PLKTGMPIHI EIPVENQGFG ADGIIAWCRP
EGQKYSVGVQ FTDSTTQFSV RMVEQICHIE HYRAEVLRVE NRDLTSEEAA KEWVEKFAAD
FPS