| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2545 |
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| Symbol | |
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| ID | 3968711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3227738 |
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| End bp | 3228721 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921643 |
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| Product | putative mRNA-binding protein |
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| Protein accession | YP_528017 |
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| Protein GI | 90022190 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0962067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000986877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAC TTTTTATTGG CGGAACAGGA AACATTAGCA CCGCGAGCAG CTGCCTTGCG
GTTGAAAAGG GCATAGAGCT TTGGCACATT AACCGCGGTA AATCTGTATG CGGCGTGCAC
GGCGTACGCA CAATTACCTG TGATGTAACC AATAGCGCGG CACTAGAAAC CGCACTTGCC
CCACACAAAT GGGATTGCGT GGTTAACTGG ATTGCCTTTA ACGCCAAAGA CGTAGAGCGC
GATATTGCGC TGTTTTCGGG CAAGACAAAA CATTACATCT ATATTAGCTC TGGCTCCTGC
TACGACTTAC CTCAGCACTC CCCCGTCATT ACCGAGAACA CGCCACTAGG CAACCCTTAC
TGGCAGTATT CAAGAGATAA GATTGCCGGC GAACAAGCGC TTATGCGTGC TCACATAGAA
AAGGGCTTCC CAGGCACTAT CGTCCGCCCC TCCCACACCT ATTCGACTAT AATACCAATC
ACCCTAGGCG GCGGGAATAA ATACAATGCA GTAAACCGTA TGAAGCTAGG TAAACCCACG
GTGGTACACG GTGACGGCAC CTCGCTATGG GTAGTCACTC ACGCAGAAGA TTTTGCCCTT
GGCCTTGTGG GCTTATTAAA CTTAGAAGCG GCAATAGGGG AAGCAGTTCA TATAACCTCT
GACGAAGTGC TTACCTGGAA CCAGATTTAT CGCCACGTTG GAGCAGCACT TGGCTTAGAA
CCCAATCTCA TACATGTTGC CAGCGATACC ATTTGCACAC TGGAACCCAG CTACACGGGC
ACCCTGCTTG GCGATAAATC CCACAGCGTG ATGTTCGATA ACAGCAAAAT ACGCAGCCTA
GTACCCAGTT TTGTACCGAT TATTCCATTT AGTGAAGGCA TACGTACCAC CATTGAATGG
TTTGAAGCCT CTAGTGACCG GCAATATATT GACCCAGACA CGGAGATTTT ACTGGATAAA
TTGACGGGTA TCGCAACCAC TTAA
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| Protein sequence | MKVLFIGGTG NISTASSCLA VEKGIELWHI NRGKSVCGVH GVRTITCDVT NSAALETALA
PHKWDCVVNW IAFNAKDVER DIALFSGKTK HYIYISSGSC YDLPQHSPVI TENTPLGNPY
WQYSRDKIAG EQALMRAHIE KGFPGTIVRP SHTYSTIIPI TLGGGNKYNA VNRMKLGKPT
VVHGDGTSLW VVTHAEDFAL GLVGLLNLEA AIGEAVHITS DEVLTWNQIY RHVGAALGLE
PNLIHVASDT ICTLEPSYTG TLLGDKSHSV MFDNSKIRSL VPSFVPIIPF SEGIRTTIEW
FEASSDRQYI DPDTEILLDK LTGIATT
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