| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2544 |
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| Symbol | |
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| ID | 3968710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3225562 |
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| End bp | 3227328 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921642 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_528016 |
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| Protein GI | 90022189 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000348617 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000942961 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATATG ATGGACATCA GAGGATAAAG CAGGTGGAAA AACTCTCCGG CGGAGACATG
TTAATTCGCG CGCTTGCAGA CGAAGGCGTT GAATATTTAT TTGGTTACCC AGGCGGTGCC
GCACTGCATA TATATGATGC AGTATTTCGT CAGAAGCGAG TCCAGCACAT TTTGGTGCGC
CACGAGCAAG CTGCAACACA CGCTGCAGAT GGCTACGCAC GTTCAACCGG TAAGGTGGGC
ACGGTGCTGG TGACTTCTGG TCCAGGTGCT ACCAATGCCA TTACGGGTAT TGCTACAGCC
TATATGGATT CAATTCCAAT GGTTGTAATT TCGGGGCAGG TGGCTTCCGA TAAGATTGGT
GAAGACGCGT TCCAAGAAAC CGATATGGTG GGGGTGTCGC GCCCAATCGT TAAGCACAGC
TTTCTTGTTA AGCATGCCAA AGACATACCC GAGATTGTCA AAAAAGCTTT CTATATTGCT
TCTACTGGCC GCCCTGGGCC TGTGGTTATT GATATCCCCA AAGATATTAC TAACCCAGTA
GATAAGTTTG AATACAGCTA CCCAGACAAA GTAAAAATTC GCTCTTACAC GCCTGCAGCG
AAAGGTCATA CTGGTCAAAT CAAAAAGGCC GTTCAGCTTT TACTAGGCGC TCGACGCCCT
ATTATTTATG CCGGCGGCGG TGTTGTGCAG GGTAATGCTA GTAATCAACT TACTGAAATA
GCCAAGCTAC TTAACTTCCC CGTTACCAAT ACGTTGATGG GGCTAGGTGC ATTTCCTGGT
ACCGATAAGC AATTTTTGGG CATGTTGGGC ATGCACGGCA CGGTAGAGGC GAATACAGCA
ATGCATCACG CCGATGTGAT ATTTGCCGTA GGTGCTCGCT TTGATGACCG CGTAACTAAC
ACGCCGTCAA AGTTCTGCCC GTCTGCCAAA ATTATTCATA TTGATATAGA CCCAGCATCA
ATATCTAAAA CAGTAACCGC AGACGTGCCA ATTGTTGGCC CCGTGGAAGG TGTGTTAGAT
GAAATGCTCG AGCTGGTTAA AGCTACTAAA GAGCGCCCAG ATACCTCAGC GATTGCCTCT
TGGTGGAAGC AAATAGACGA ATGGCGCGAC CGCTATAGCA TCATAGATAC CCCGCGTTAC
GACACGGGCG GCATGATTAA GCCGCAAGAA GTAGTGCGCA TGGTTCACGA AGTGACAGGT
GGCGACGCTT ATGTGTGTTC CGATGTGGGT CAGCACCAAA TGTTTAGTGC GCAGTACTAC
CAGTTTGATA AGCCGCGCCG CTGGATCAAC TCTGGTGGCT TGGGCACTAT GGGCTTTGGT
TTACCTGCTG CGATGGGCGT GCAAATTGCA CATCGTGACG CCAATGTGGT GTGTGTAACA
GGTGAAGGCA GTATACAAAT GTGTATTCAA GAGCTTTCTA CCTGCACGCA GTATCACTTG
CCGGTTAAGA TTATTTGTAT CAATAACCAA GCGCTAGGTA TGGTTAGACA GTGGCAAGAT
ATGCAATACG AAAGCCGCTA CTCAGAAAGC TTGTACGAAG ATTCTCTGCC AGATTTTGTT
AAGTTGATGG AAGCCTACGG CCATGTTGGT ATGAAGGTAA CCAAGCGTGA AGAGCTTAAA
AGCAAGCTAG AAGAGTGTTT TGCCATGAAA GACAAAACTG TGTTTATGGA TATCTATGTC
GACCCGAACG AGCATGTTTA CCCCATGCAG GTAGCACCTA ACGGTTCTAT GCGCGATATG
TGGTTGAGTA AGTCGGAGCG TACATAA
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| Protein sequence | MKYDGHQRIK QVEKLSGGDM LIRALADEGV EYLFGYPGGA ALHIYDAVFR QKRVQHILVR
HEQAATHAAD GYARSTGKVG TVLVTSGPGA TNAITGIATA YMDSIPMVVI SGQVASDKIG
EDAFQETDMV GVSRPIVKHS FLVKHAKDIP EIVKKAFYIA STGRPGPVVI DIPKDITNPV
DKFEYSYPDK VKIRSYTPAA KGHTGQIKKA VQLLLGARRP IIYAGGGVVQ GNASNQLTEI
AKLLNFPVTN TLMGLGAFPG TDKQFLGMLG MHGTVEANTA MHHADVIFAV GARFDDRVTN
TPSKFCPSAK IIHIDIDPAS ISKTVTADVP IVGPVEGVLD EMLELVKATK ERPDTSAIAS
WWKQIDEWRD RYSIIDTPRY DTGGMIKPQE VVRMVHEVTG GDAYVCSDVG QHQMFSAQYY
QFDKPRRWIN SGGLGTMGFG LPAAMGVQIA HRDANVVCVT GEGSIQMCIQ ELSTCTQYHL
PVKIICINNQ ALGMVRQWQD MQYESRYSES LYEDSLPDFV KLMEAYGHVG MKVTKREELK
SKLEECFAMK DKTVFMDIYV DPNEHVYPMQ VAPNGSMRDM WLSKSERT
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