| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2539 |
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| Symbol | |
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| ID | 3968739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3216567 |
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| End bp | 3217583 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921637 |
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| Product | ketol-acid reductoisomerase |
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| Protein accession | YP_528011 |
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| Protein GI | 90022184 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0059] Ketol-acid reductoisomerase |
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| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0383173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00121107 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGTTT ATTACGATAA AGATTGCGAT CTTTCTATTA TCCAAGGCAA AAAAGTAGCC
ATCATTGGTT ACGGTTCACA AGGTCACGCA CACGCGTGCA ACCTTAAAGA TTCTGGCGTA
GATGTAACCG TTGGTTTGCG TACTGGTTCT TCTTCTGTTG CTAAGGCGGA GGCCCACGGC
CTTAAAGTAG CCGATGTTGC AACTGCAGTA GCTGCGGCGG ATGTGGTAAT GATCCTTACT
CCAGACGAAT TCCAAAGCGT TCTATATAAA GAAGAGATTG AGCCAAACAT TAAGCAGGGC
GCTACTTTGG CGTTTGCTCA CGGTTTTGCT ATCCACTACA ACCAAGTTGT GCCGCGTGCA
GACCTTGATG TAATCATGGT TGCTCCTAAA GCTCCTGGCC ACACTGTGCG TTCAGAGTTT
GTTAAAGGCG GCGGTATTCC AGATTTGATT GCAATTTTCC AGGATGCATC TGGTACAGCA
AAAGAAGTAG CGCTTTCTTA TGCTTCTGGT GTTGGTGGTG GTCGTTCAGG CATCATCGAA
ACAACCTTTA AAGATGAGAC TGAAACTGAC CTATTTGGTG AGCAAGCAGT ATTGTGTGGC
GGTGCCGTAG AATTGGTTAA AATGGGCTTC GAAACCCTTA CCGAAGCTGG CTATGCCCCA
GAAATGGCTT ACTTTGAGTG TTTGCATGAA TTGAAATTGA TTGTTGATCT TATGTACGAA
GGCGGTATCG CTAACATGAA CTACTCAATT TCTAACAATG CTGAGTACGG CGAATACGTA
ACCGGCCCTA AAGTAATCAA CGAAGAAAGC CGCAAGGCTA TGCGTCAAGC CCTTAAAGAT
ATCCAGCAAG GCGAATACGC TAAAAACTTC ATCTTGGAAG GTCAGTCCAA CTACCCATCT
ATGACTGCTT GGCGTCGTAA CAACGCTGCT CACCCTATCG AGCAGGTTGG TGGTAAGTTG
CGTGCAATGA TGCCTTGGAT TGAAAGCAAT AAAATTATCG ATAAGACTAA AAACTAA
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| Protein sequence | MQVYYDKDCD LSIIQGKKVA IIGYGSQGHA HACNLKDSGV DVTVGLRTGS SSVAKAEAHG
LKVADVATAV AAADVVMILT PDEFQSVLYK EEIEPNIKQG ATLAFAHGFA IHYNQVVPRA
DLDVIMVAPK APGHTVRSEF VKGGGIPDLI AIFQDASGTA KEVALSYASG VGGGRSGIIE
TTFKDETETD LFGEQAVLCG GAVELVKMGF ETLTEAGYAP EMAYFECLHE LKLIVDLMYE
GGIANMNYSI SNNAEYGEYV TGPKVINEES RKAMRQALKD IQQGEYAKNF ILEGQSNYPS
MTAWRRNNAA HPIEQVGGKL RAMMPWIESN KIIDKTKN
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