Gene Sde_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2521 
Symbol 
ID3968746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3193520 
End bp3193999 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID637921612 
Producthistidine kinase 
Protein accessionYP_527993 
Protein GI90022166 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCAGCC ATACCAAAGT TTTATCAAGC GGTACCTCCG TTGAGGTGGC CCCGTTTTCC 
TCTGTCGATT TACCAGCAAT TTTTGCTATC GAGCAAGCGG CTAGTGTTCA CCCTTGGAGC
TTAAAAAACT TCGAGGATTC GCTGGCCTTG CAGCATTTGT GTTTAGGGGT AAAGTTGGCG
GGTGAGTGGG TAGCGGTTGT GGTAGTGCAG CACAAGGTAG TGGATGCTGA AGTGCTTATT
CTTGCTGTGC ACCCTAAAGC GCAAAGGCGA GGCATAGCGA GGGCGTTGCT GGACGTTGTT
ATCGATAAGT ATCTGGTTGC AGCCGAGCGG CTTTTTTTAG AGGTGCGCGC GTCGAATGAC
CCCGCAATTG CTCTATATGA AGAGTTGGGC TTTAACTGTA TGGGCGAGCG TAAAAACTAT
TACCCATCGG GAAAGGGCAG GGAGGATGCG CTTATTTATG GTTTGGAATT ACAGCTATAA
 
Protein sequence
MTSHTKVLSS GTSVEVAPFS SVDLPAIFAI EQAASVHPWS LKNFEDSLAL QHLCLGVKLA 
GEWVAVVVVQ HKVVDAEVLI LAVHPKAQRR GIARALLDVV IDKYLVAAER LFLEVRASND
PAIALYEELG FNCMGERKNY YPSGKGREDA LIYGLELQL