Gene Sde_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2482 
Symbol 
ID3968559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3134761 
End bp3135279 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content47% 
IMG OID637921573 
Producthypothetical protein 
Protein accessionYP_527954 
Protein GI90022127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.470104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACT TGCTGCAACA ATGTTTGGGT AATGACTACG CGCTACTGTG CCCCATAGTA 
AAAGCTGCAC ACACTGGTGA GTCTCAACTT AAGGGTACAG TTTGGGTTAG GCAAGGTAAT
ATTTTTGCTC GCGCTTTGTG CAAAATAATG GCTATGCCAC CGCAAACGAA TAGCGTTGAG
CTTACCGTGC ATGGCAAACA CGACAACAAC AATATGCACT GGGATAGAAA GTTCGGCAAC
TTTAAAATGA ATTCTCATTT TGCCAAAAGC GGCAACCAAC TTGTCGAAAA GCTTGGCCCG
CTCAACATGC ATCTAGCACT TTCCGTGAAC AACGGCACGC TTGAATACCG CCTACAAAAA
ACCTACTTTT GGGGCATTCC CGTTCCGCAC TTTCTGGCCC CAAAGGTAGA AGCCAATGAA
GGGGAGCACG CAGGCTTATA CCGCTTTAGC GTATATGTGT TTTTACCCGT TATTGGCTTA
GTTGTAAGCT ACGGCGGCGA TATGCAGCTC TGCTCCTAA
 
Protein sequence
MSNLLQQCLG NDYALLCPIV KAAHTGESQL KGTVWVRQGN IFARALCKIM AMPPQTNSVE 
LTVHGKHDNN NMHWDRKFGN FKMNSHFAKS GNQLVEKLGP LNMHLALSVN NGTLEYRLQK
TYFWGIPVPH FLAPKVEANE GEHAGLYRFS VYVFLPVIGL VVSYGGDMQL CS