Gene Sde_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2479 
Symbol 
ID3968556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3132678 
End bp3133202 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID637921570 
ProductTonB-like 
Protein accessionYP_527951 
Protein GI90022124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT TAACATTGCT CGTTTCTATG GGCGCACTAT GTATAAGCCT GCAGACTATG 
GCAGAGAACC ATAAAGTAGG CGCCACACTA AACAAAAAAC AAGCCCTGCC CATTAGTGAG
ATACCGGCTA ATGTGCTGGC TGCAATTAAG CCATTAGCGC CCGACCTTGC AATTGCCCAA
GCAGAGAAAG AGTGGAAACA CGGTAACGTC TATATAGATG TAGAAGGCAC CTTGCCCAAT
GGCCAAGAAA TAGAGTTTGA CCTATTGCAA ACCGGTAATA CTTGGCAGGT TGTTGAAGTG
CAGCGTGACT TAATGTGGGA AGCAACCCCC CAAAATGTTC GCGACGCACT AGTGGCAGAC
TCCCCAAAAT TTAAAGCAAA GCGCATTATA GAAAGCGTGC AGCACGGTCA AAACATTACA
GTTTATGAGT TTTACAGCGT GGACGCCGAT GGCAAAGAAT CTCGCAAAGA AGTGAAAGTA
GAAGCTGGTA AAGCAGAAGT ACTGCAAAAA GAGTGGCAAC ACTAA
 
Protein sequence
MKTLTLLVSM GALCISLQTM AENHKVGATL NKKQALPISE IPANVLAAIK PLAPDLAIAQ 
AEKEWKHGNV YIDVEGTLPN GQEIEFDLLQ TGNTWQVVEV QRDLMWEATP QNVRDALVAD
SPKFKAKRII ESVQHGQNIT VYEFYSVDAD GKESRKEVKV EAGKAEVLQK EWQH