| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2374 |
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| Symbol | |
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| ID | 3967368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3005122 |
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| End bp | 3006501 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921465 |
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| Product | hypothetical protein |
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| Protein accession | YP_527846 |
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| Protein GI | 90022019 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.060586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAT TATCACAACC ATCTCGACGT AAGTTCCTCA TGGGGTTAGC TAAAACTGGC
ATGCTGCTAC CGTTTGCAGG GCAAATGTTA GGGCAAAAAG CATTGGCTGC AGGTACTGGT
GCGCAGCGGG TTTTATTTAT GTATTACCCT AATGGCGTTG TGCCCTATAA CTGGCGGCCG
CAGCAAGATA GTGGCGCTAT TACCACTACC AACGAGCTAA GCTTTGGTTT GGGGCCGTTA
AAAGATTGGC ACAATAAAAT GATTGTGTTT AAAAATTTAA ACCTAGACGT AGGCCAAGGT
GCTGGGGCGC ACTACAACGA TATGCGCGGT ATTTTAACCG GCGATAACCA AATAGGCGTC
GACGGCGCGA GTATCGATCA CTTAATTGCA GAGCGCTTGG GCGACGAGGG CGTATTAAGT
TTGGGTGTGC GTACTGGGCC TAAAAAAGAC ATTATGATCT CTAAACCGCG CGGTTATAAA
ACCGATAGCC GCCCAATACC GAATAACGAC CCGCGCGATG TCGCAAGTAA ATTGGCGCTG
CGTATTGGTC CATCAGACGG TTTATCCGAT AACAAAAAGG CTATGTACGA AGCTATATTG
TCAGACTTTG ATGACCTAGC CGATGCAACC CTAACTAATA CGCGGCAAAC CAAATTAGAT
TTTCATAGCA ATGCGTTAAT TCGCCTGCGC GATCAAGCCG GTACTAAAGT GGGGGAGTGT
GGTTTTAATA GTAACGTGAT GACCGACCCC TATTATGAAA CAACCCAAAG CTTAACCTCT
ACCGAGTGGC AAATGTTCCC GCACTTGGCT AGGGCGCAGG TAGATAATAT TGTTGGCGCC
TTCGCTTGCG GTTTGCATAA GGTAGCCACC TTGCAGCTTT CCAAAGGCGA TGAGAACGGC
AACTTAGTGA ATTACTCTTT CGATGAATGC TGGCAAATGG CCCAGGATGC AGTAGCACAA
GGTATTAAAC CCGATGCAAA CTCTGGCCCT GTAAGCGAAA TGACCCGCTG GTACAACGAG
CACGCCAGCC ACAGCGCATC CCATAGGCCG GGGGCTGTGC CACACACGGC GCAAGTGCGT
TGGTATCACT CATTGTTGGC CTATACCCTG CAGCAGCTGC AGGCTCGCGG TTTATTAGAC
GATACCCTTG TAGTGTTGTT TTCGGAAGTT GGCGAAGGTG CTAAGCACGG TGGGGCTGCA
GGTTCGGTAA CCCTTGCTGG CGGTGCTGCC GGCGATTTAG AAATGGGGCG CGTTATTTAC
TGTGGTGATG GCAATAACGA TGGTCACAGG GTGTGGGGCA GTCACCAATT ATTTGGTGAT
ATTGCACGCT TAGTGGGTGC TCCAGATATT GGCGGGCCTT GGTCTGGCGG CGTTATTTAA
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| Protein sequence | MSKLSQPSRR KFLMGLAKTG MLLPFAGQML GQKALAAGTG AQRVLFMYYP NGVVPYNWRP
QQDSGAITTT NELSFGLGPL KDWHNKMIVF KNLNLDVGQG AGAHYNDMRG ILTGDNQIGV
DGASIDHLIA ERLGDEGVLS LGVRTGPKKD IMISKPRGYK TDSRPIPNND PRDVASKLAL
RIGPSDGLSD NKKAMYEAIL SDFDDLADAT LTNTRQTKLD FHSNALIRLR DQAGTKVGEC
GFNSNVMTDP YYETTQSLTS TEWQMFPHLA RAQVDNIVGA FACGLHKVAT LQLSKGDENG
NLVNYSFDEC WQMAQDAVAQ GIKPDANSGP VSEMTRWYNE HASHSASHRP GAVPHTAQVR
WYHSLLAYTL QQLQARGLLD DTLVVLFSEV GEGAKHGGAA GSVTLAGGAA GDLEMGRVIY
CGDGNNDGHR VWGSHQLFGD IARLVGAPDI GGPWSGGVI
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