Gene Sde_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2333 
Symbol 
ID3968547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand- 
Start bp2958043 
End bp2958789 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content39% 
IMG OID637921424 
Producthypothetical protein 
Protein accessionYP_527805 
Protein GI90021978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.83902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0456221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATC CCGAAGTTAA GAAACTTTAT AAGTATCGTG CGTTCAACGA ATTCTCATTG 
AGAATGCTTG TAAATCGAGA AATGTGGGTT GCGAAACCAG CAAGCTTCAA TGACCCTTTT 
GATTGCGCCT TAACCCCTGG AAATCCGAAG ACCACTGCTG ATCAACTGCA TCAGTTGAGT 
AATCTTATTA GAGAGCTTTA TGAGCCTGAA GAAGCCGAGA AGCAAATTAG AGAGATTGTT 
GAGAGGAATC ATCTTAAACC CGTCGAGGAA GTGGAAGATA AATCCATCGA AAAACATATG 
CTTGAGGCGA GAGAATCGGG CGTATTCTCG TTAAGTGAAA AAAATGATGA CATACTTATG 
TGGTCGCACT ATGCGAACAA TCATACTGGC TTTTGTATCG AATTTGAGAG AAAGGATGTT 
AAGAGTAATT TTCTAAGCCA TTTTATGTGT AGAAAGGTTG AATATACTGT TGAGTATCCG 
AACCTACATC GGATCATAGA TTTACTGGAT GTTAATTTAT TTACTAAAGC TGACGGCTGG 
AAGTACGAAT CTGAATGGAG GCTTGTGACT AAACAAGGAA ATACTACCCT ACCTCTACCA 
GCACCAATTA CAGCCATATA CTTTGGTCTT CGCTCTAGCG ATGACAGTAT CAAAACAGTA 
AAAAATATCT TCTCAAATGA ACAAATCGAA TTTTATAGAG CAAGCCGTAA ACAAGGGGAG 
TTTGCAATTG AATTCATGGG AATCTAA
 
Protein sequence
MEHPEVKKLY KYRAFNEFSL RMLVNREMWV AKPASFNDPF DCALTPGNPK TTADQLHQLS 
NLIRELYEPE EAEKQIREIV ERNHLKPVEE VEDKSIEKHM LEARESGVFS LSEKNDDILM 
WSHYANNHTG FCIEFERKDV KSNFLSHFMC RKVEYTVEYP NLHRIIDLLD VNLFTKADGW 
KYESEWRLVT KQGNTTLPLP APITAIYFGL RSSDDSIKTV KNIFSNEQIE FYRASRKQGE 
FAIEFMGI