Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2218 |
Symbol | |
ID | 3965456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2820088 |
End bp | 2820561 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921308 |
Product | putative flagella synthesis protein FlgN |
Protein accession | YP_527690 |
Protein GI | 90021863 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3418] Flagellar biosynthesis/type III secretory pathway chaperone |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.632773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTTA CACCTCAAGC TATTCAGGGC CAAATTGTCG CTGATATTAA AGCCTGCGAA TCGTTGCTCA CTCTCTTTGA ATCTGAACGC GAAGCCTTAA AAATACGTGA TAGCGACGCA CTTGAAGCTA TCTTGCAAAA CAAAAACGCC TGCATACAGA TATTGGAAAA CAGCGCCAAA CAGCGCGCTA TCTGGTCTCA ACAAGCCGCT CAAAACGACC CCGAAAACGG TTGGGATACC CTTATTGAAT CGTTAAGCCA CACCCAAGTA AAAGAACAAT GGGGCACGCT AAAAGAGCTG TTTAAACGCT GCAAAGAAGA AAACGAGATT AATGGCCGAT TAGTAGCGAG AAACCAGCAG GTATTTGGGC GATTAATAGA AATTTTGCGC GGGCAAACCA ACGCACCCAA CCTGTATAAC GCTAAAGGAA GCGCCTCATC CAATGCGGGA TCAAATCGAT TCGGCGAGGC TTAA
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Protein sequence | MSVTPQAIQG QIVADIKACE SLLTLFESER EALKIRDSDA LEAILQNKNA CIQILENSAK QRAIWSQQAA QNDPENGWDT LIESLSHTQV KEQWGTLKEL FKRCKEENEI NGRLVARNQQ VFGRLIEILR GQTNAPNLYN AKGSASSNAG SNRFGEA
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