Gene Sde_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2218 
Symbol 
ID3965456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2820088 
End bp2820561 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID637921308 
Productputative flagella synthesis protein FlgN 
Protein accessionYP_527690 
Protein GI90021863 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.632773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTA CACCTCAAGC TATTCAGGGC CAAATTGTCG CTGATATTAA AGCCTGCGAA 
TCGTTGCTCA CTCTCTTTGA ATCTGAACGC GAAGCCTTAA AAATACGTGA TAGCGACGCA
CTTGAAGCTA TCTTGCAAAA CAAAAACGCC TGCATACAGA TATTGGAAAA CAGCGCCAAA
CAGCGCGCTA TCTGGTCTCA ACAAGCCGCT CAAAACGACC CCGAAAACGG TTGGGATACC
CTTATTGAAT CGTTAAGCCA CACCCAAGTA AAAGAACAAT GGGGCACGCT AAAAGAGCTG
TTTAAACGCT GCAAAGAAGA AAACGAGATT AATGGCCGAT TAGTAGCGAG AAACCAGCAG
GTATTTGGGC GATTAATAGA AATTTTGCGC GGGCAAACCA ACGCACCCAA CCTGTATAAC
GCTAAAGGAA GCGCCTCATC CAATGCGGGA TCAAATCGAT TCGGCGAGGC TTAA
 
Protein sequence
MSVTPQAIQG QIVADIKACE SLLTLFESER EALKIRDSDA LEAILQNKNA CIQILENSAK 
QRAIWSQQAA QNDPENGWDT LIESLSHTQV KEQWGTLKEL FKRCKEENEI NGRLVARNQQ
VFGRLIEILR GQTNAPNLYN AKGSASSNAG SNRFGEA