Gene Sde_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2207 
Symbol 
ID3965977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2809713 
End bp2810405 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID637921297 
ProductHpt sensor hybrid histidine kinase 
Protein accessionYP_527679 
Protein GI90021852 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAGTC TAAAAAATAC ATACAAAGCG CTTATTGCCG TTAATTGCTC GCTATTTTTT 
TCAGGTTGTG TGGTTCATCA ACCGGTTGCA CCCGGCGACC CGTATTATGC GCCCGTATTA
AGTACCAGCT CACAAGCGCA ACCGCCAGCA AATGGTTCGT TGTACTCACC CAATTCATCT
ATCGACCTTT TTAGCGACAG AAAAGCACTA CGTGTTGGCG ATATTATTAC GGTGGTATTG
CAAGAACGCA CCTCGTCTAA AAAGTCATCC AATATTGGCG TGAAAAAAGA TAACGATATA
TCGCAAGGCT CGAGCACTGT ATTTGGAACG ACTCCCGGCT TGGGTAACCT TGGCTTAGGG
CTAGATGTAC AGGGCGAGCG AGAATTTAAA GGCGAAGCCG ACTCCGACCA AAGCAATCAG
CTTACTGGCA GCATCACTGT AACAGTGGTC GAGGTGTATC CCAATGGCAC CTTGTCCATT
CGCGGCGAAA AATGGATGAC GTTAAACCGC GGCGATGAGT TTATTCGGGT AAGCGGCTTA
GTAAGGCCCG ATGATGTGGG CCCAGATAAC ACGGTAGTGT CTACCAAAAT CGCCAATGCG
CATATTAGTT ATTCCGGTGA AGGTGAATTC GCAGATTCGC AAAAAATGGG TTGGTTAACA
CAGTTCTTTA ATGGCCCAAT TTGGCCATTT TAA
 
Protein sequence
MVSLKNTYKA LIAVNCSLFF SGCVVHQPVA PGDPYYAPVL STSSQAQPPA NGSLYSPNSS 
IDLFSDRKAL RVGDIITVVL QERTSSKKSS NIGVKKDNDI SQGSSTVFGT TPGLGNLGLG
LDVQGEREFK GEADSDQSNQ LTGSITVTVV EVYPNGTLSI RGEKWMTLNR GDEFIRVSGL
VRPDDVGPDN TVVSTKIANA HISYSGEGEF ADSQKMGWLT QFFNGPIWPF