| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2164 |
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| Symbol | |
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| ID | 3967548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2756990 |
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| End bp | 2757742 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921254 |
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| Product | flagellar protein FliS |
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| Protein accession | YP_527636 |
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| Protein GI | 90021809 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.980839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTCT CAGTGGCAGA AAATTTGATG GTCTACGAAA AACCTAAGGA AGGAGACCAA
GAAATAAAGG TAGAGGATTA CGCCTATCTC GTGAAACGTA TCGCCCATCA TATGATGGCG
CGCATGCCTT CGTGCGTTCA AATAGAAGAT TTAATTCAAG CGGGCATGCT GGGGCTGCTA
GAAGCAGCAC AAAAATATGA CGCCAGTAAA GGCGCAAGCT TCGAAACCTA TTCTGGAATA
CGCATTCGCG GTGCCATTGT AGATGAAATG CGCCGCGGAG ACTGGGCGCC TAGGTCTGTA
CATCGCAACA GTCGACGTGT AGCAGAGGCA ATAGCCACAG TAGAGGCTCG CCATGGGCGC
GATGCACGCG ACCACGAAAT AGCAGAAGAG ATGGGTTTAA GCCTTGACGA GTACTACGCT
ATGGCGCGCG ATAGTGCATC TACTCGCCTG TTTAGCTACG AAGAAACCTA CGAAAACGAT
GAGTCGCGCT TTGACGAATA CGAGCCTAGT GACGGTTTGC GCGGCCCCTC CGAACAAGTT
CACCGTAATG CCCTCTACAC CGATTTAGTG GCCGCCATTG GCAAATTGCC AGAGCGAGAG
AGGCTTGTGC TATCGCTGTA TTACGAACAG GAAATGAACC TAAAAGAAAT TGGGCTAGTA
CTTGGTGTAT CTGAATCTAG GGTAAGCCAA ATCCACAGTC AGGCTGCTTT AAGGCTCAAA
TCCCGCATGC AAGATTGGCA ATCGTACGAA TGA
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| Protein sequence | MAVSVAENLM VYEKPKEGDQ EIKVEDYAYL VKRIAHHMMA RMPSCVQIED LIQAGMLGLL
EAAQKYDASK GASFETYSGI RIRGAIVDEM RRGDWAPRSV HRNSRRVAEA IATVEARHGR
DARDHEIAEE MGLSLDEYYA MARDSASTRL FSYEETYEND ESRFDEYEPS DGLRGPSEQV
HRNALYTDLV AAIGKLPERE RLVLSLYYEQ EMNLKEIGLV LGVSESRVSQ IHSQAALRLK
SRMQDWQSYE
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