| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2158 |
|---|
| Symbol | |
|---|
| ID | 3967542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2750505 |
|---|
| End bp | 2751371 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637921248 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_527630 |
|---|
| Protein GI | 90021803 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAA GGCAGCCAAT AGAAACAAAA ATTAATCACG AACGTTGGTT AGTCTCCTAC
GCCGATTTTA TTACGCTGCT ATTTGCTTTT TTTGTGGTTA TGTATTCAGT TTCGCAGGTT
AACGAAACCA AATATCGCAC CTTATCTGAA ACCTTGGGTA ACGCGTTTTC TAGTAGCGCC
AAAAAAACAA ATAAAAACCG TTCGCCCGAC ACTACCGAAG CAGAAGTGGC GCCCCTTAAG
CAAATAGAAC AGCAGCTGGA ACAGGCTTTA AGCGGTGTGC TAGCTACCGG TGAGGTAACG
TTAAATGGCA ATCAAAACTG GGTGGAAATT GTAATAGATG CAAATTCATT CTTTTCGTCT
GGGCAGGCCA CTCCAAGTGA TGAGGCGCGC ACTGTCTTAA ACAAGGTTGC CGATATTATC
TCCCCCTTTG ATAACGCTGT AGCAGTGGGT GGCCATACCG ACGACACGCC AATAAACAAT
GCCCAATTCA AAAATAACTG GGAGCTATCT TCCGCCCGAG CAGTGACGGT GGTGAATCTA
TTGGCCTTTG CAGGTGTTAG CCCCGAGAGA ATGTCTGCTG TAGGTTACGG GGAATACCGA
CCTATCGCCG ATAACCAAAC ACCCGAGGGG CGCAGTGCCA ATAGGCGTGT TGTGTTACGT
GTAGCCCGCG ATAGGGCCGA TATTCCTAAA GTGATTGCGC CCAATGCAAT TCCCCAAAGC
GAAACGCCTG CAACGCCAGC CAACCCAGAG CCAGTAGTTA ACCCCGGCCC AGCTGAAGAG
CAACCAGAAA CAGTCGAACC AGTAAGATTA AAAAACGGTG GCTTACTGTT TACAAGCGAC
CCCGATAGAG CGCGAAACAA TCGATAG
|
|---|
| Protein sequence | MIRRQPIETK INHERWLVSY ADFITLLFAF FVVMYSVSQV NETKYRTLSE TLGNAFSSSA
KKTNKNRSPD TTEAEVAPLK QIEQQLEQAL SGVLATGEVT LNGNQNWVEI VIDANSFFSS
GQATPSDEAR TVLNKVADII SPFDNAVAVG GHTDDTPINN AQFKNNWELS SARAVTVVNL
LAFAGVSPER MSAVGYGEYR PIADNQTPEG RSANRRVVLR VARDRADIPK VIAPNAIPQS
ETPATPANPE PVVNPGPAEE QPETVEPVRL KNGGLLFTSD PDRARNNR
|
|---|
| |