Gene Sde_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2139 
Symbol 
ID3967523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2730536 
End bp2730841 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content43% 
IMG OID637921229 
Productflagellar transport protein FliP 
Protein accessionYP_527611 
Protein GI90021784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.564392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCGG GCATAGCAAA GTGGATTAAA CGGTTGTTGA TATTTTGTTG GCTGCTGTTT 
ATTTGTATTT TAGGCGCATG GTTGGCCACC CAAAACGAAC AGCCGTTATC TATATCGCTG
TTTATAGTGC AACTACCAGA GCTTACCGCT GGTTTGTATA TGTGCTTTAT TTTTACAGCA
GGTGTATTGC TGGGGTTTCT AACCAGTTAT ATAAGCACGC AGGGCAGGTT AATTGCGCGC
AATCGCGCCC TTAAAAAAGC AAAGAAAGAA GTGTCCTCAC TAAAACAGGT AGCGGTTAAG
GAGTAG
 
Protein sequence
MLAGIAKWIK RLLIFCWLLF ICILGAWLAT QNEQPLSISL FIVQLPELTA GLYMCFIFTA 
GVLLGFLTSY ISTQGRLIAR NRALKKAKKE VSSLKQVAVK E