| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2122 |
|---|
| Symbol | |
|---|
| ID | 3967506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2711156 |
|---|
| End bp | 2711662 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637921212 |
|---|
| Product | CheW protein |
|---|
| Protein accession | YP_527594 |
|---|
| Protein GI | 90021767 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0925774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.486668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAGT TTAAAACGTC TTTGTTTCAC TATAAGGATA TTGCTATTTC CGTTTCCACA
TTTAATGGCC TTTTAGGGGT TTATGTGCGT AGGTATTTTT ACAGTTCTAC TTTAAAAAAA
TGTGGCGATG GTTTGACTGT TTTCTTTGGG GCTTATATTT GTTATGAGGA TGTGGCAATA
GGAAACGATT GTACTATTGA AGAGTATAGT CTCTTATCAA GATGTGAGCT TGGTAATGAT
GTGGTGATTG CGGCCGGAGT ATCTGTGATG AGTGGGGCGC ATCATCATAA TATTCGGGAT
TTGGATACGC TATTCAGAAA GTCTCAGGGC TTGTTGAAGA CCGTCCGAAT TGGAGATAAT
ACATGGATTG GTACAAAATC TGTAATAATG AATGATATAG CTGCAAACTC TATCGTTGGT
GCTGGTGCTG TTGTAACTCG TCCCGTGAAT GAGTTTGACA TAGTGGCTGG TGTGCCTGCG
AAAGTAATAG GCAGTCGTAA GGCATAG
|
|---|
| Protein sequence | MAKFKTSLFH YKDIAISVST FNGLLGVYVR RYFYSSTLKK CGDGLTVFFG AYICYEDVAI
GNDCTIEEYS LLSRCELGND VVIAAGVSVM SGAHHHNIRD LDTLFRKSQG LLKTVRIGDN
TWIGTKSVIM NDIAANSIVG AGAVVTRPVN EFDIVAGVPA KVIGSRKA
|
|---|
| |