| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2116 |
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| Symbol | |
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| ID | 3967500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2705111 |
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| End bp | 2706070 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921206 |
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| Product | putative nucleotide di-P-sugar epimerase or dehydratase |
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| Protein accession | YP_527588 |
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| Protein GI | 90021761 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.987047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TATTTGTTGC GGGACACAAA GGAATGGTTG GGTCGGCTAT TGTGCGCCAA
TTGAAAAAAC AGCCAGATGT TGAATTGATA TTGCGCGATA AGACTCAGCT TGATTTGTTG
AATCAGGATA GTGTTACAGT TTTTTTTGAA AATGAAGAAA TTGATCAAAT TTACCTTGCA
GCGGCAAAAG TAGGAGGAAT AGTCGCGAAT AATGCGTATC CTGCTGAGTT TATTTACGAA
AACTTAATGA TCGAGTGCAA TATCGTGCAC TCGGCGCATT TGGCTGGTAT TAATGATCTT
TTATTTTTGG GGTCTTCTTG CATATACCCC AAATTTGCAG AACAACCGAT GAAAGAGCAA
GCCTTGTTAA CAGGTATTTT GGAGCCGACA AATGAACCTT ATGCGATCGC AAAAATAGCC
GGTATTAAAT TGTGCGAATC GTACAATAGA CAGTACGCAC GTAATTACCG CAGCGTAATG
CCAACTAATT TATATGGGGA AAATGACAAT TTCCACCCTG AAAACTCTCA TGTTATCCCG
GCCCTGCTTC GACGATTTCA TGAGGCTAAG GTGAGTGGCG TGCCAGAAGT GGTTGCATGG
GGTTCCGGTG CGCCTAGGCG AGAGTTTTTG CATGTGGACG ACATGGCGGC TGCCTGTATT
CATATTATGA ATTTAGATGC TGCAGTTTAT GAGTCGAATA CGCAACCAAT GTTAAGTCAT
ATTAATGTCG GTACGGGGGT TGATTGCACT ATTCGTGAAT TGGTCGAGGC CGTAGCTGGA
GTGGTAGGGT ATTTGGGTAA AATCACATTT GACTCGTCCA AGCCGGATGG TGCTCCTCGA
AAGTTAATGG ACACTTCTTG TGTAAATGCT CTAGGTTGGA GGCATTCTAT AAGTTTGCAT
TCTGGGTTGG CTCGAACCTA TGAGTGGTTT TTAGAGAATC ATGATAAATT TAGGTGCTGA
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| Protein sequence | MKKIFVAGHK GMVGSAIVRQ LKKQPDVELI LRDKTQLDLL NQDSVTVFFE NEEIDQIYLA
AAKVGGIVAN NAYPAEFIYE NLMIECNIVH SAHLAGINDL LFLGSSCIYP KFAEQPMKEQ
ALLTGILEPT NEPYAIAKIA GIKLCESYNR QYARNYRSVM PTNLYGENDN FHPENSHVIP
ALLRRFHEAK VSGVPEVVAW GSGAPRREFL HVDDMAAACI HIMNLDAAVY ESNTQPMLSH
INVGTGVDCT IRELVEAVAG VVGYLGKITF DSSKPDGAPR KLMDTSCVNA LGWRHSISLH
SGLARTYEWF LENHDKFRC
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