| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2096 |
|---|
| Symbol | |
|---|
| ID | 3967480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2680038 |
|---|
| End bp | 2680514 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637921186 |
|---|
| Product | putative phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_527568 |
|---|
| Protein GI | 90021741 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | [TIGR00249] phosphohistidine phosphatase SixA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0001187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGT TTGTGCTGCG GCATGGTCAT GCAGAAGCCG AAGCTTCGAG CGATAGTTTA
CGTCCTTTGT CTGCTACTGG GGCAAAAGAA GTAGCAGAAA TTTACAGCAA GTGTAGTGAC
AGTCTCGCTA GTGTAGAGTT AATTTTAGTA AGCCCCTATG TGCGTGCTCA GCAAACGTTG
AGTACGCTTA CCGCTCTTTC TCCCCACCTT CAAAATGTTC CCCAGCAAAC AACTACGCTG
CTTGTACCTG GGGCAAGTTC TATGGCGGTT ATCGATTATT TATATACTCA GGCGACGGAA
TGCTCTGTAG GGTCTATTTT GTTAGTAAGC CACCAACCTT TAGTCGGCAC ATTAGTAGAC
AGCTTGTGTA ATTTAGATCC AGGCTGTTAT CGCATGGGAA CTGCTGCAAT GGCGTCTATT
GACGCAGATG TAGTGGCTGC CGGTTGTGCT GAGTTAAGGT GGTTGCGCCA CCCGTAA
|
|---|
| Protein sequence | MELFVLRHGH AEAEASSDSL RPLSATGAKE VAEIYSKCSD SLASVELILV SPYVRAQQTL
STLTALSPHL QNVPQQTTTL LVPGASSMAV IDYLYTQATE CSVGSILLVS HQPLVGTLVD
SLCNLDPGCY RMGTAAMASI DADVVAAGCA ELRWLRHP
|
|---|
| |