| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2086 |
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| Symbol | |
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| ID | 3967470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2669539 |
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| End bp | 2670957 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921176 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_527558 |
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| Protein GI | 90021731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGTA AAACCCTATA CGACAAGCTT TGGGATGACC ATCTAGTTCA GCAGCGCGAT
GACGGCTCCG CGTTACTGTA CATAGATAGG CACATTGTTC ACGAAGTAAC TTCTCCGCAG
GCTTTTGAAG GGTTGCGGTT AGCAAAGCGC AAGCCGTGGC GTGTAGATTC TGTGGTTGCC
ACGCCAGATC ATAACGTACC TACAACGCAA AAAGAGCGCG CTTCTGGGGT AGAGGGTATC
GAAGACCCTA CCTCCCGTAT TCAGGTGCAA ACGTTAGATT CCAACTGCGA TGAGCTTGGC
ATTCTAGAGT TTAAAATTAA TGATGCACGC CAAGGTATTG TGCACGTGGT TGGCCCTGAA
ACCGGCGCAT GCCTGCCTGG AATGACCATT GTATGTGGTG ACTCCCATAC CTCTACCAAC
GGCGCCCTAG GTGCGTTAGC AATGGGTATT GGTACCAGTG AAGTGGAGCA CGTACTTGCT
ACCCAGTGTT TAGTTGCTAA AAAAATGAAA AGCATGCTGG TTAAGGTGGA TGGCAAGCTT
GGTGCAGGTG TTACACCGAA AGACGTTGTG TTGGCCATTA TTGGCAAAAT AGGCACTGCT
GGTGGTACAG GTTATGCCAT CGAGTTTGGC GGTGAAGTTA TGCGATCTAT GTCGATGGAA
GGTCGTTTAA CTGTGTGTAA CATGGCTATT GAGGCTGGTG CTCGCGCCGG TATGGTCGCT
GTAGACGATA TCACTATCGA TTATGTAAAA GGCCGCTCAT TTGCACCCAA GGGTGAACAT
TGGGAGCAAG CTGTTGCAGC ATGGCGCGAT CTAAAAAGCG ATGACGACGC GGTGTTTGAT
GCGGTTGTTG AGCTTCGTGG GGAAGAGATT CTGCCGCAAG TTAGTTGGGG TACATCACCA
GAGATGGTGT TGCCCGTTGA TGCGTCTATT CCAGACCCTG AGCTAGAAAC CGATGCAGTT
AAGCAAAACG GCATGCGTCG CGCGTTGCAA TACATGGGGC TTAAAGCAGG GCAGGCGATA
AAAGATATAT ATGTCGATCG TGTTTTTATT GGTTCGTGTA CTAACTCACG CATAGAAGAT
ATACGTGCCG CTGCTGAAGT GGTGAAAGGG CGTACTAAAG CTGCCAGCGT AAAAGAAGCT
ATTGTGGTGC CCGGCTCTGG AGCAGTTAAG GCGCAAGCCG AAGCAGAAGG CTTAGATAAA
ATCTTTGTTG AGGCTGGTTT AGAGTGGCGC GAGCCAGGTT GCTCTATGTG CTTAGCAATG
AACGCAGATA AGTTGGGTGA CGGAGAGCAT TGCGCTTCCA CCTCAAATCG CAACTTTGAG
GGGCGCCAAG GTTACGGTGG TCGAACGCAT TTGGTTAGCC CTGCGATGGC GGCAGCAGCT
GCCATAGCTG GCCATTTTGT TGATGTTCGC GAGTTTTAG
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| Protein sequence | MGGKTLYDKL WDDHLVQQRD DGSALLYIDR HIVHEVTSPQ AFEGLRLAKR KPWRVDSVVA
TPDHNVPTTQ KERASGVEGI EDPTSRIQVQ TLDSNCDELG ILEFKINDAR QGIVHVVGPE
TGACLPGMTI VCGDSHTSTN GALGALAMGI GTSEVEHVLA TQCLVAKKMK SMLVKVDGKL
GAGVTPKDVV LAIIGKIGTA GGTGYAIEFG GEVMRSMSME GRLTVCNMAI EAGARAGMVA
VDDITIDYVK GRSFAPKGEH WEQAVAAWRD LKSDDDAVFD AVVELRGEEI LPQVSWGTSP
EMVLPVDASI PDPELETDAV KQNGMRRALQ YMGLKAGQAI KDIYVDRVFI GSCTNSRIED
IRAAAEVVKG RTKAASVKEA IVVPGSGAVK AQAEAEGLDK IFVEAGLEWR EPGCSMCLAM
NADKLGDGEH CASTSNRNFE GRQGYGGRTH LVSPAMAAAA AIAGHFVDVR EF
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