| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2074 |
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| Symbol | |
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| ID | 3967458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2653885 |
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| End bp | 2655540 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921164 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_527546 |
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| Protein GI | 90021719 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAA TAGACATAAT TCGCACCTAC GCCCAGAAGC GCTGCCTAAT TGTGGACGAT
GTACCAGACA TTCGCGCCTC CCTTAAACGC ATGCTAACTG ACTTTGGCTG CAGCGATGTA
GACACAGCGG GTAATGCAGA AGAAGCTATT GACCTGTGCG AGCGCAACCA CTACCAAATT
CTCATCGCCG ACTACAACTT GGGTTCCGGC AAAAATGGCC AACAACTGCT CGAAGAGCTT
CGTTTTCACC GTCTACTAAG AAACACCTCG CTATTTATAA TGATAACGGC CGAAAACGCC
AGCCACTATG TTCTGCACGC GCTCGAATAC CAGCCCGACG ACTATCTAAG CAAACCCATC
ACACGGCAAG GCCTTAGAGC TCGACTCGAT CAAGACCTAC TAAGAAAAGA AACATTAACC
CCAGTAAACG AATGCCTAGA CCAAAACAAA CCGCGCAAAG CCATTGAAGC CTGCATGCAA
TTAATGCAGG AAGAAACACG CTATAAAACC GATATTTGCA AAGTGTTGGG CGAACTATTG
TGCGAAGTTG AAGAGTACCC GCAGGCACTA CAGCTTTATA GCGGGCTATA TAACGAGAAG
TCGCCTATTT GGGTGCAATT GGGCTACGCC AAAGCACTAT TCGGCACCAA AGAAATAGCG
AAAGCTAAGG CAGCCCTAAC CAAGCTAATT GCCGAGTCAC CTTTATGTGT AGACGCGCAC
GAATTACTAG CAGAATTGTT GGAAAGCCAA AATCAAATAG AGCAAGCCCA ACATACAATG
GCGCAAGCTG TATCTCTTTC ACCTCAATCA GTAAACCGGC AACGAGAACT CGGCAGAATT
TGCAAAGCTG CTGGCGATAA CATAGCTGCG CTACACGCAT TTAGAGCCGC CTTGCGCCAT
GGCAAAAACT CCTGCCATGA AGCCCCCGCA GACTACATTA GCCTTGCAGA TACACTCATA
CATGTGGGCA AAAACGAAAC TGGGCAAACT GCAAAGAAAT ATGCCGATGA AGCACTAGAA
GCGGTAAAAC AAGTTGAGAA AAAATTTAGC CGACACCCTA TTGCCAAGAT TCACAGCAAG
CTCGTGGAGG CAGAGGTGTT CGACATGCTT GAAAACGCCA CAGCAGCAGA CCAGGCAACC
GAAGCAGCTA TAGCCATGCT TGCCGCGGTA ACGCCTAGCA TATTAAACAA TTCACCAATC
GACTTTTCCA TAAGCTGCGC TCAGGCGCTT ATTGAGCGAG GCAAATACGA CGAAGGCGAG
AAATTATTAC AAGCAGTGGC AGCAATTAAC TCTAACCACG ACAAAGCAAT AAAAATAGAT
AAGTTGTTGC GTGAACCACT TACTAGCGAA GGGATAGAGT ATGCCACCAA GCTAAACAAG
CTAGGCATTA CCCACTACCA AAAAAAACAA TATCACGAAG CGGTAAACGC ATTTACGTCA
GTATTAAGAG AACTACCCAA TCACATTGGG TTAAACCTAA ACTTGATTCA AGCATTAGTG
AGCAAAGCAA AATCGCAACC CCTTAACCAA ACAGAGCTAT CTTTGCTAGA TAGTAGCTTG
TTACGCATTG GCGAACCCGA GGCTGATTCG CAACACGCAA GCAGAGTAAA CTACCTTAAA
AAGCAGATAG AAAAAATTAA AGCAGATACA ATATAA
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| Protein sequence | MKQIDIIRTY AQKRCLIVDD VPDIRASLKR MLTDFGCSDV DTAGNAEEAI DLCERNHYQI
LIADYNLGSG KNGQQLLEEL RFHRLLRNTS LFIMITAENA SHYVLHALEY QPDDYLSKPI
TRQGLRARLD QDLLRKETLT PVNECLDQNK PRKAIEACMQ LMQEETRYKT DICKVLGELL
CEVEEYPQAL QLYSGLYNEK SPIWVQLGYA KALFGTKEIA KAKAALTKLI AESPLCVDAH
ELLAELLESQ NQIEQAQHTM AQAVSLSPQS VNRQRELGRI CKAAGDNIAA LHAFRAALRH
GKNSCHEAPA DYISLADTLI HVGKNETGQT AKKYADEALE AVKQVEKKFS RHPIAKIHSK
LVEAEVFDML ENATAADQAT EAAIAMLAAV TPSILNNSPI DFSISCAQAL IERGKYDEGE
KLLQAVAAIN SNHDKAIKID KLLREPLTSE GIEYATKLNK LGITHYQKKQ YHEAVNAFTS
VLRELPNHIG LNLNLIQALV SKAKSQPLNQ TELSLLDSSL LRIGEPEADS QHASRVNYLK
KQIEKIKADT I
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