Gene Sde_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1974 
Symbol 
ID3967139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2483741 
End bp2484208 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content42% 
IMG OID637921062 
Productphospho-2-dehydro-3-deoxyheptonate aldolase, subtype 1 
Protein accessionYP_527446 
Protein GI90021619 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC AACAACTCAA AAAAATTATG ACTAAAGCAC AAGATATATG TGCTCATTCT 
GGGGGCCGGT TAACCGATAA GCGTAAACGA ATCCTAGAAA TACTACTGCT TTCCAAAACA
CCGCTTTCGG CCTATGAAGT GGCCGACACC TATAATAAAA GCTCTGAAAA TGCCATGCCG
GCAATGTCTG CTTACCGCAT GTTAGATTTT TTAGAGTCTG AAGAGCTAGT GCACAAGCTC
AGCTCAACCA ATAAGTACGT TGCATGCTCC CATATTGCCT GTGATCACGC CCACCAAATA
CCCCAGTTTT TAATTTGTGG CCGCTGTCAG GCCGTAAAAG AAATAGGTAT AGCTAAGCAC
ATAGTACAAG AACTGGATGC GGTAATAACC AATGCCGATT ACAAGCTAAT TAACCCACAG
TTAGAGCTAC AGTGCCTATG TAAAGCTTGC TCGAAATTAG CTGAGTAA
 
Protein sequence
MNKQQLKKIM TKAQDICAHS GGRLTDKRKR ILEILLLSKT PLSAYEVADT YNKSSENAMP 
AMSAYRMLDF LESEELVHKL SSTNKYVACS HIACDHAHQI PQFLICGRCQ AVKEIGIAKH
IVQELDAVIT NADYKLINPQ LELQCLCKAC SKLAE