| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1908 |
|---|
| Symbol | |
|---|
| ID | 3966972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2410175 |
|---|
| End bp | 2411140 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637920993 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527380 |
|---|
| Protein GI | 90021553 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.110697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACCT TTAAGAGGGC CTCGTATTTA TTGGTTTGTT GCTATTTGTT GTTTAGCAGC
TTTCACGCAG GGGCTTGGTC GCTCGCGTGG CACGGTACCA TTGCCAGCAG CGCGTTAGAC
GGCGGAGCCA GCGAAGGTCA ACAAAAAACA CTTATCGCAT ATGCTAACGT GTTATCTAGT
GAGTTTTCTG CCGAGCGAAA GGATTGGCAG CGACGCACAA GATATGAAAT TAAAAAGCCT
AGTTCAAGCG CTGCACTTGC AGAGAAAGCA GCTTACGAAG CCGCTTGGCT TGCTGCGTGG
CCAGATTTAG TACGTAGCCA AAAACTGAGT GTGCTTTTTA AAGCCGTAGG TGCCACCACA
CCAGCCGATT TAGCGGCATA TAAAAATTAC ACAACCTCTA CATGGCACTA TCACAATGTT
TTTTACGATT CTAATAACAA GCTTTTATTG AGTTGCAATA AAAAGAATCG TGGCAAGTTA
TACTCGGCGC TATCTGCGCT AGAATCTTCG TTGCAGTCAG ATCTTTCTAT TAGTCAGCAG
GCTATTGCAT TTGCTTTTTA TGTTCACCTC GTAGGCGACG CTCACCAACC CTTGCATAAT
GTTAGCCGAG CAAATAAACA CTGTGAACAC GATCGCGGTG GTAATACCTA TTGCTTAAAA
AAGAAGGGCG CAAAATGCAG TTTAAATGCT CATCAGTTTT GGGATTTGGC AGCATTTAAC
CCAGTGGAAT CCATTGATAT TCAGCCCGTC AAGCATAAGG CTGCTTGCGG TACTTCACCT
GCTTGGGGAA GCTATTTACT GGCAGAGGCA AAAGAGCTAG TAGTGAATTT GTACCCGAAG
AACGATGATT TCAATAATGC AAAATATCGA AGTAACGCAA AAAGTATTGC TAAAAGTAGA
ATAGAGATGG CTGCGAGCAG GACTGCTCAA ATAATGAAAT GCTATTTGAG GGATGCCAAT
AAATAA
|
|---|
| Protein sequence | MITFKRASYL LVCCYLLFSS FHAGAWSLAW HGTIASSALD GGASEGQQKT LIAYANVLSS
EFSAERKDWQ RRTRYEIKKP SSSAALAEKA AYEAAWLAAW PDLVRSQKLS VLFKAVGATT
PADLAAYKNY TTSTWHYHNV FYDSNNKLLL SCNKKNRGKL YSALSALESS LQSDLSISQQ
AIAFAFYVHL VGDAHQPLHN VSRANKHCEH DRGGNTYCLK KKGAKCSLNA HQFWDLAAFN
PVESIDIQPV KHKAACGTSP AWGSYLLAEA KELVVNLYPK NDDFNNAKYR SNAKSIAKSR
IEMAASRTAQ IMKCYLRDAN K
|
|---|
| |